Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00003
(632 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 146 3e-35
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 146 3e-35
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 146 3e-35
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 145 5e-35
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 37 0.026
BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p pro... 31 0.98
AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA... 31 0.98
BT016114-1|AAV36999.1| 949|Drosophila melanogaster LD10780p pro... 30 3.0
AE013599-1182|AAF58744.1| 949|Drosophila melanogaster CG12325-P... 30 3.0
AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA... 29 6.9
M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein... 28 9.1
BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p pro... 28 9.1
BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro... 28 9.1
AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro... 28 9.1
AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-P... 28 9.1
AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB... 28 9.1
AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA... 28 9.1
AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD... 28 9.1
AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC... 28 9.1
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 146 bits (353), Expect = 3e-35
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 6/106 (5%)
Frame = +1
Query: 256 VHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTS 435
VHFRRP T PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H
Sbjct: 157 VHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLR 216
Query: 436 ANKHHIKAAVKKLYDINVAKVNTL------TGLMVRRKRTYDSLEM 555
ANK+H++AAV+KLYDI VAKVN L VR R YD+L++
Sbjct: 217 ANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 262
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 188 ALKAQRKVVKGEHGKRVRKIR 250
A K Q+K++KG G R RKIR
Sbjct: 134 AKKVQKKIIKGAFGTRARKIR 154
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 146 bits (353), Expect = 3e-35
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 6/106 (5%)
Frame = +1
Query: 256 VHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTS 435
VHFRRP T PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H
Sbjct: 157 VHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLR 216
Query: 436 ANKHHIKAAVKKLYDINVAKVNTL------TGLMVRRKRTYDSLEM 555
ANK+H++AAV+KLYDI VAKVN L VR R YD+L++
Sbjct: 217 ANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 262
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 146 bits (353), Expect = 3e-35
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 6/106 (5%)
Frame = +1
Query: 256 VHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTS 435
VHFRRP T PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H
Sbjct: 165 VHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLR 224
Query: 436 ANKHHIKAAVKKLYDINVAKVNTL------TGLMVRRKRTYDSLEM 555
ANK+H++AAV+KLYDI VAKVN L VR R YD+L++
Sbjct: 225 ANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 270
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 188 ALKAQRKVVKGEHGKRVRKIR 250
A K Q+K++KG G R RKIR
Sbjct: 142 AKKVQKKIIKGAFGTRARKIR 162
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 145 bits (351), Expect = 5e-35
Identities = 71/106 (66%), Positives = 81/106 (76%), Gaps = 6/106 (5%)
Frame = +1
Query: 256 VHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTS 435
VHFRRP T PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H
Sbjct: 165 VHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLR 224
Query: 436 ANKHHIKAAVKKLYDINVAKVNTL------TGLMVRRKRTYDSLEM 555
ANK H++AAV+KLYDI VAKVN L VR R YD+L++
Sbjct: 225 ANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDI 270
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 188 ALKAQRKVVKGEHGKRVRKIR 250
A K Q+K++KG G R RKIR
Sbjct: 142 AKKVQKKIIKGAFGTRARKIR 162
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 36.7 bits (81), Expect = 0.026
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 303 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKQAP 449
+P+E+ A ++ HG +QHH +P+ +EED QH GL + +Q P
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEP 211
>BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p
protein.
Length = 985
Score = 31.5 bits (68), Expect = 0.98
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 280 TSWVC-GNAQVANFPYSLPMFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 134
TS +C A +AN M+ Y+ P LK +NR H+F L+L + G
Sbjct: 352 TSNICTAQALLANMS---AMYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA
protein.
Length = 985
Score = 31.5 bits (68), Expect = 0.98
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 280 TSWVC-GNAQVANFPYSLPMFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 134
TS +C A +AN M+ Y+ P LK +NR H+F L+L + G
Sbjct: 352 TSNICTAQALLANMS---AMYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>BT016114-1|AAV36999.1| 949|Drosophila melanogaster LD10780p
protein.
Length = 949
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 226 WEESTENSQLVHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN 405
WE S S L RPK PP+ K + + D N+++ E + K+ ED
Sbjct: 216 WECSLAPSDLEDAERPK-IAPPQRKKEKKAVSDNESEDDVENVVEKDALKEESTKEAEDV 274
Query: 406 N 408
N
Sbjct: 275 N 275
>AE013599-1182|AAF58744.1| 949|Drosophila melanogaster CG12325-PA
protein.
Length = 949
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 226 WEESTENSQLVHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN 405
WE S S L RPK PP+ K + + D N+++ E + K+ ED
Sbjct: 216 WECSLAPSDLEDAERPK-IAPPQRKKEKKAVSDNESEDDVENVVEKDALKEESTKEAEDV 274
Query: 406 N 408
N
Sbjct: 275 N 275
>AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA
protein.
Length = 2016
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 196 GSEEGCKR*TWEESTENSQLVHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTS 375
GS E R ++S E ++V PK P+K+ K+ AYN++ L S
Sbjct: 1513 GSGEREHRSREKQSRERDEIVPSPLPKKRDENDQSPVPKKTAEKKTEASAYNLVDQILES 1572
Query: 376 EAAMKK 393
E +++
Sbjct: 1573 EKTVEQ 1578
>M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein
protein.
Length = 1638
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 402
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p protein.
Length = 1761
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 395 LKITTPWSLLFTQVQTSTISRLQSRNSMI*MLL 493
L + PW L F ++ TS+I R SM+ +LL
Sbjct: 1124 LTLNEPWKLGFAELSTSSILRQAGDGSMVFILL 1156
>BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p protein.
Length = 1634
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 402
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p protein.
Length = 1638
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 402
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-PC,
isoform C protein.
Length = 1997
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 395 LKITTPWSLLFTQVQTSTISRLQSRNSMI*MLL 493
L + PW L F ++ TS+I R SM+ +LL
Sbjct: 1360 LTLNEPWKLGFAELSTSSILRQAGDGSMVFILL 1392
>AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB,
isoform B protein.
Length = 1638
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 402
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA,
isoform A protein.
Length = 1638
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 402
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD,
isoform D protein.
Length = 1634
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 402
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC,
isoform C protein.
Length = 1634
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 307 PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 402
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,920,160
Number of Sequences: 53049
Number of extensions: 492673
Number of successful extensions: 1565
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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