Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00003
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal prote... 108 3e-24
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z54235-7|CAA90974.3| 611|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 29 3.7
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 29 3.7
AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical ... 29 3.7
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 29 3.7
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 29 3.7
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 3.7
AC024797-3|AAF60706.1| 112|Caenorhabditis elegans Hypothetical ... 29 3.7
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 28 6.4
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z93388-1|CAB07658.1| 355|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical pr... 27 8.4
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 113 bits (272), Expect = 1e-25
Identities = 52/92 (56%), Positives = 68/92 (73%)
Frame = +1
Query: 256 VHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTS 435
VHFRRPKT R P+Y RKS P R+++D++ +IK P T+E++MKKIED+NTLVFIV
Sbjct: 34 VHFRRPKTLVTARAPRYARKSAPARDKLDSFAVIKAPHTTESSMKKIEDHNTLVFIVDEK 93
Query: 436 ANKHHIKAAVKKLYDINVAKVNTLTGLMVRRK 531
ANKHHIK AV LY++ KVNTL + ++K
Sbjct: 94 ANKHHIKRAVHALYNVKAVKVNTLITPLQQKK 125
>U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 25.1 protein.
Length = 147
Score = 108 bits (260), Expect = 3e-24
Identities = 51/92 (55%), Positives = 67/92 (72%)
Frame = +1
Query: 256 VHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTS 435
VHFRRP T R ++PRKS PK ++MD + II+ PLT+E+AMKKIE++NTLVFIV
Sbjct: 35 VHFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQHPLTTESAMKKIEEHNTLVFIVSND 94
Query: 436 ANKHHIKAAVKKLYDINVAKVNTLTGLMVRRK 531
ANK+ IK AV KLY++ KVNTL + ++K
Sbjct: 95 ANKYQIKDAVHKLYNVQALKVNTLITPLQQKK 126
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
protein F16B12.6 protein.
Length = 1392
Score = 30.7 bits (66), Expect = 0.91
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = +1
Query: 223 TWEESTENSQLVHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 402
++ ES E+ + F P RHP R+ P+R + +K LT A+ +
Sbjct: 177 SYRESDEDYSVNDFAHPPDLE--RHPLSKRRGRPRRPQEQLETNVKLKLTRPASKAQRAP 234
Query: 403 NNTLVFIVHTSANKHHIKAAVKKL 474
V +AN+ HIK ++L
Sbjct: 235 PTEPVAARTATANQRHIKLFEEEL 258
>Z54235-7|CAA90974.3| 611|Caenorhabditis elegans Hypothetical
protein C09G9.4 protein.
Length = 611
Score = 30.7 bits (66), Expect = 0.91
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 355 IKFPLTSEAAMKKIEDNNTLVF--IVHTSANKHHIKAAVKKLYDINVAKVNTLTGLMVRR 528
+K P +E + ++D +V I HT ++H K A K L D+ + ++ G V
Sbjct: 155 VKVPEKAEELTEILKDLKEIVIPNICHTHHPRYHAKFAGKSLADLVASTISAALGHDVNS 214
Query: 529 KRTYDSLEMMTHWTLPTKLA 588
+S+E + L T +A
Sbjct: 215 SPIIESIERIICKWLSTSMA 234
>Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical
protein C09H6.3 protein.
Length = 593
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 418 FIVHTSANKHHIKAAVKKLYDINVAKVNTLTGLMVRRKRTY-DSLEMMTHWTLPTKLASY 594
F H +A ++H +AA+KKL+ ++ NT+ L + TY + L+M ++ + L +
Sbjct: 378 FRQHENA-ENHFRAAMKKLHKEDITAHNTMALLNLNLAITYLNQLKMADYYEVSENLTAP 436
Query: 595 KL 600
K+
Sbjct: 437 KI 438
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 238 YSLPMFTFYNLPLSLKCFSNRFHYFF 161
+S + FYNL L KCFS FH+ F
Sbjct: 3293 FSKKVTFFYNL-LQSKCFSKHFHWLF 3317
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 310 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 474
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical
protein T01A4.1b protein.
Length = 637
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 310 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 474
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 79 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 131
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 310 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 474
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 647 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 699
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 310 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 474
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 454 KAAVKKLYDINVAKVNTLTGLMVRRKRTYDSLE 552
+AA K L NVA++N L GL K+T D ++
Sbjct: 687 EAAAKALSSENVAEINKLNGLRDALKKTLDGVK 719
>AC024797-3|AAF60706.1| 112|Caenorhabditis elegans Hypothetical
protein Y48G8AR.3 protein.
Length = 112
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 256 VHFRRPKTFXPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAM 387
+ FRR + RH R+++P ++ I KFP SE A+
Sbjct: 1 MEFRRKCSRSAMRHKSQKRRAMPNQDVEKVNEIFKFPRISEQAL 44
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 185 KALKAQRKVVKGEHGKRVRKIRNLCISADPR 277
K KA+R+ + E KR+RK+ ++ + DPR
Sbjct: 259 KQNKAERERRRKEEAKRIRKLVDIAYAKDPR 289
>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
protein Y70C5A.2 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 400 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLTGLMVR 525
D N L F V +S K K+ + IN+ +N +TGL +R
Sbjct: 482 DQNILKFFVISSIYKQGKKSIIDVQEIINLEILNNITGLRIR 523
>Z93388-1|CAB07658.1| 355|Caenorhabditis elegans Hypothetical
protein T10C6.1 protein.
Length = 355
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -2
Query: 280 TSWVCGNAQVANFPYSLPMFTFYNLPLSLKCFSNRFHYF--FLSLNPSLFGLRCNLQFG 110
TSW N + A F ++P+F +S + F R +F LS +PSL + N++FG
Sbjct: 130 TSWTSLNLRNAMFWGTVPLFVGLFWTVSTRIFLGRNTFFDIALSRDPSLAKFQ-NIRFG 187
>Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical
protein F07C6.1 protein.
Length = 329
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = -3
Query: 528 SSYHQACECVDFSNIYIIEFLDCSLDMVLVCTCVNNKDQGVVIFNLLHC 382
+SYH AC D N+++ + ++C N K + I+N C
Sbjct: 98 NSYHLACFTCDECNVHLNSQIAYRYQGTILCFLCNQKKPKMRIYNCNKC 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,932,103
Number of Sequences: 27780
Number of extensions: 258915
Number of successful extensions: 875
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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