Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00002
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FND9 Cluster: Putative uncharacterized protein; n=1; ...    38   0.18 
UniRef50_P40353 Cluster: Alcohol O-acetyltransferase 1; n=7; Sac...    35   2.2  

>UniRef50_A2FND9 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1505

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 302  AYTPCPFPKIDSSN*NEISTTTGYHYINKTQCELNITILLCCLVFGSVQQIQGHVEGY 129
            ++ P    +   +N N+I T    + +N  + E NI+I L CL FG++ +I   VE +
Sbjct: 1209 SFIPTLLKRFSENNQNQIQTEIYKYLMNNLENEQNISIFLICLDFGNIDEITKKVEPF 1266


>UniRef50_P40353 Cluster: Alcohol O-acetyltransferase 1; n=7;
           Saccharomyces|Rep: Alcohol O-acetyltransferase 1 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 525

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 88  FRAITTST*PGLGM*PSTWPCICCTEPKTKQQSKIVMLSSHCV 216
           F+  TT T P  G    +W  IC  E  T++  K + +S+HC+
Sbjct: 151 FKLTTTLTIPYFGPTGPSWRLICLPEEHTEKWKKFIFVSNHCM 193


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,858,666
Number of Sequences: 1657284
Number of extensions: 13642298
Number of successful extensions: 30344
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30341
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)