Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0576.Seq
         (596 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7QKK8 Cluster: Chromosome chr2 scaffold_113, whole gen...    33   6.7  
UniRef50_A5AI89 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_A0BGW9 Cluster: Chromosome undetermined scaffold_107, w...    33   6.7  

>UniRef50_A7QKK8 Cluster: Chromosome chr2 scaffold_113, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr2 scaffold_113, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 357

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 135 SLSERGRAGLHLSTDQISDALARCNRMHDAGLVGKITIHLVSIRISGTVDI 287
           + +E GRAG+  +    S  L  C RM D G  G++ IH  +I++    DI
Sbjct: 205 AFTEMGRAGVKRNEFTYSSVLRACGRMKDHGRCGRL-IHASTIKLGLESDI 254


>UniRef50_A5AI89 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 543

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 135 SLSERGRAGLHLSTDQISDALARCNRMHDAGLVGKITIHLVSIRISGTVDI 287
           + +E GRAG+  +    S  L  C RM D G  G++ IH  +I++    DI
Sbjct: 401 AFTEMGRAGVKRNEFTYSSVLRACGRMKDHGRCGRL-IHASTIKLGLESDI 450


>UniRef50_A0BGW9 Cluster: Chromosome undetermined scaffold_107,
           whole genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_107,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 309

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +2

Query: 191 CSSEMQSNAR-CRFSWKNNNSSCINSDFWNGGHNLK*LLL 307
           C SE+Q NA+ CR  W N     IN D W+    L  L L
Sbjct: 162 CKSEIQRNAKQCRERWNNKLDPQINRDPWSKSEELNFLQL 201


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,953,469
Number of Sequences: 1657284
Number of extensions: 9709595
Number of successful extensions: 19143
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19136
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)