Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0576.Seq
         (596 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0530 - 34545699-34546013,34546121-34546354,34547006-345470...    28   4.9  
09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,158...    27   8.6  

>03_06_0530 -
           34545699-34546013,34546121-34546354,34547006-34547078,
           34548226-34548299,34548852-34549004
          Length = 282

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -2

Query: 385 FHNYFTHFMQETSEILMYKHNEREITQ*QLF*IMSTVPEIR-IDTR*IVIFPTKPA 221
           +H+    F    +E ++Y HNE + TQ + +  +STVP  R ++   I + P   A
Sbjct: 172 YHDTVHQFAPTYNEYVLYNHNEGDSTQ-RKYPSVSTVPSGRDVELSGISVMPANSA 226


>09_01_0102 +
           1582793-1582898,1582988-1583093,1584115-1584172,
           1584676-1584745,1585132-1585197,1586374-1586429,
           1587992-1588078,1588819-1589139,1589827-1589946,
           1590747-1590881,1591529-1591605,1591681-1591756,
           1592800-1592874,1592971-1593075,1593299-1593374,
           1594482-1594617,1594702-1594804,1595186-1595298,
           1596907-1597111,1597173-1597301,1597403-1597517,
           1597710-1597795,1599108-1599203,1599615-1599751,
           1600374-1600476,1601809-1601888,1602013-1602091,
           1602241-1602298,1602489-1602586,1602673-1602767,
           1602861-1602918
          Length = 1074

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 499 LTRINEHFNIFYRNCCSREPHTGCREFLHT 588
           L  I EHFNI   N C        REFLH+
Sbjct: 146 LIEIIEHFNIDVENPCVIMSQDKSREFLHS 175


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,372,965
Number of Sequences: 37544
Number of extensions: 265171
Number of successful extensions: 447
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)