Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0576.Seq
         (596 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128467-1|AAM75060.1|  999|Drosophila melanogaster RE21674p pro...    29   6.3  
AF235935-1|AAF60313.1| 1203|Drosophila melanogaster sodium/hydro...    29   6.3  
AE014134-3339|AAF53961.2| 1291|Drosophila melanogaster CG9256-PB...    29   6.3  
AE014134-3338|AAF53960.2| 1291|Drosophila melanogaster CG9256-PA...    29   6.3  

>AY128467-1|AAM75060.1|  999|Drosophila melanogaster RE21674p
           protein.
          Length = 999

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 245 NSSCINSDFWNGGHNLK*LLLCNLAFVV 328
           NSSC +SD W G  + + LL+C LA ++
Sbjct: 80  NSSCTSSD-WRGMFSKRTLLICALALIL 106


>AF235935-1|AAF60313.1| 1203|Drosophila melanogaster sodium/hydrogen
           exchanger protein protein.
          Length = 1203

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 245 NSSCINSDFWNGGHNLK*LLLCNLAFVV 328
           NSSC +SD W G  + + LL+C LA ++
Sbjct: 61  NSSCTSSD-WRGMFSKRTLLICALALIL 87


>AE014134-3339|AAF53961.2| 1291|Drosophila melanogaster CG9256-PB,
           isoform B protein.
          Length = 1291

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 245 NSSCINSDFWNGGHNLK*LLLCNLAFVV 328
           NSSC +SD W G  + + LL+C LA ++
Sbjct: 80  NSSCTSSD-WRGMFSKRTLLICALALIL 106


>AE014134-3338|AAF53960.2| 1291|Drosophila melanogaster CG9256-PA,
           isoform A protein.
          Length = 1291

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 245 NSSCINSDFWNGGHNLK*LLLCNLAFVV 328
           NSSC +SD W G  + + LL+C LA ++
Sbjct: 80  NSSCTSSD-WRGMFSKRTLLICALALIL 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,769,977
Number of Sequences: 53049
Number of extensions: 484066
Number of successful extensions: 841
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)