Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0575.Seq
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.5  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   5.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = +1

Query: 112  EYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 240
            EYPKC+ V  +       +     +R  S     KN ++  A+
Sbjct: 2443 EYPKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLSAAV 2485


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +3

Query: 177 YLATWLQYRAHGKKHNDAQSHQRP 248
           YL  W+  R   + H D    +RP
Sbjct: 15  YLNIWVPQRLRIRHHGDKPPQERP 38


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 79  NYFVKIIQLLDEYPKCF 129
           N   KI  L+DE+ +CF
Sbjct: 214 NLHNKICNLIDEFNECF 230


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 401 QWGNGTRTSW 372
           Q+GNG  TSW
Sbjct: 274 QFGNGLETSW 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,176
Number of Sequences: 336
Number of extensions: 4119
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)