Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0574.Seq
(777 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 40 0.002
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 37 0.016
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 36 0.027
02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711 35 0.083
03_06_0691 + 35576319-35576702,35576803-35576885,35576972-355770... 33 0.25
03_02_0066 - 5361724-5362373,5362422-5362479,5363797-5364073,536... 33 0.25
07_02_0020 - 11897013-11897168,11897521-11897637,11898141-118981... 33 0.33
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 33 0.33
12_02_0767 + 22986313-22986422,22986968-22987316 31 1.0
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849... 31 1.0
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587... 30 1.8
12_02_1211 - 27033927-27034029,27034130-27034273,27034358-270344... 30 2.4
12_01_0630 - 5203802-5204111,5204896-5204900 30 2.4
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 29 3.1
02_02_0526 + 11185825-11186832,11187795-11187869 29 3.1
05_03_0035 - 7592177-7592938 29 4.1
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 29 4.1
10_06_0062 - 10233885-10234082,10235868-10236004,10236103-10236424 28 7.2
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 28 7.2
06_03_0411 - 20520823-20521674 28 7.2
06_01_0169 - 1346281-1349188,1350069-1350184 28 7.2
01_07_0044 - 40701286-40701408,40701642-40701758,40702406-407024... 28 7.2
09_04_0377 + 17086775-17088310 28 9.5
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 28 9.5
01_05_0458 + 22432192-22432309,22433980-22434296 28 9.5
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3
Query: 693 FGTGNTGINFSKYEDIPVEASG 758
F T NTGINF YEDIPVE SG
Sbjct: 208 FDTANTGINFDAYEDIPVETSG 229
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = +3
Query: 657 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASG 758
P E E+ G NTGINF YEDIPVE SG
Sbjct: 283 PFANSEAAEVDFEGE-NTGINFEAYEDIPVETSG 315
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 705 NTGINFSKYEDIPVEASG 758
NTGINF YEDIPVE SG
Sbjct: 130 NTGINFDAYEDIPVETSG 147
>02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711
Length = 372
Score = 34.7 bits (76), Expect = 0.083
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +3
Query: 441 LE*IREME*S*TRTGPTRASRRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRR 620
L+ I+ +E R+ R RRA E AP D W EP+P EE+ DD R
Sbjct: 44 LDEIKHVEEEVLRSPRRRRVRRAPE--IASAAPAVDDWHEPDPIEEEQDED---DDDDAR 98
Query: 621 TRSRKDENDWTVPLPRDERQELLL 692
R + + L R E ++LLL
Sbjct: 99 EERRARIRERALLLRRHEEEQLLL 122
>03_06_0691 +
35576319-35576702,35576803-35576885,35576972-35577012,
35577974-35578018,35578217-35578371,35579116-35579265,
35579386-35579481,35579738-35579854,35579969-35580088,
35580170-35580262,35580351-35580467,35580815-35580931,
35581089-35581151,35581238-35581399
Length = 580
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +1
Query: 493 GPRDVHVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLA 669
G V V+ N R G K+R KS+ L + LD+ TRM+GQY +LA
Sbjct: 370 GDIPVRVKNSYNRRAPGTVITKTRDLS-KSILTSIVLKSNITMLDIVSTRMLGQYGFLA 427
>03_02_0066 -
5361724-5362373,5362422-5362479,5363797-5364073,
5364264-5364409
Length = 376
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 495 ASRRAREEDY----EPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPL 662
ASRR RE D+ P + R +P PR SD R RSR +E+ V
Sbjct: 22 ASRRERERDHTHGRRPHSSSRSRRDDPSPRRRREDRRHHESDRSHRHRSRAEESAKAV-- 79
Query: 663 PRDERQE 683
RD++++
Sbjct: 80 DRDQKRD 86
>07_02_0020 -
11897013-11897168,11897521-11897637,11898141-11898197,
11898278-11898370,11898452-11898571,11898774-11898890,
11899254-11899349,11899445-11899594,11899932-11900086,
11901047-11901257
Length = 423
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +1
Query: 493 GPRDVHVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLA 669
G V V+ N R G K+R K+V L + LD+ TRM+GQY +LA
Sbjct: 256 GDIPVRVKNSYNRRAPGTLITKARDMS-KTVLTSIVLKSNITMLDIVSTRMLGQYGFLA 313
>01_01_0066 -
513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 486 PTRAS-RRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDW 650
P+R RR PPA RN++ + P A+ S R D V + R KD +D+
Sbjct: 347 PSRPGIRRDDRTSLVPPASRNEKRDKAHPHADRESVDRPDLDHVIQRRRPKDRHDY 402
>12_02_0767 + 22986313-22986422,22986968-22987316
Length = 152
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 125 QLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGEESK 238
+L+G+D+ P P ++ IP H R+ +D GE+SK
Sbjct: 72 RLSGIDMMPPPPSTS---IPSHQERERNMAADGGEKSK 106
>08_02_0526 +
18184146-18184168,18184247-18184438,18184846-18184954,
18185071-18185220,18185973-18186136,18186273-18186359,
18187083-18187137,18187911-18188333
Length = 400
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 477 RTGPTRASRRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVR 617
R +R+ + + PP R + P PR RS SR DD+R
Sbjct: 33 RRSTSRSPPPKKSDSRSPPPRRRSTSRSPRPRRHGRSRSRSRDDDLR 79
>08_02_1091 +
24256025-24256190,24256806-24257978,24258066-24258733,
24258994-24260065,24260241-24260563,24260647-24260835,
24261400-24261506,24262103-24262163,24262617-24262634
Length = 1258
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 164 STGRYIPPHLRRQLQATSDQGEESKRSSLDTVLVSHGTTVHHSEA 298
+ GR PP L L + +G +K SS+D + + ++HH+++
Sbjct: 36 AAGRRPPPWLLPALDSVPARGNNTKMSSIDLAHMRNENSLHHAQS 80
>12_02_1211 -
27033927-27034029,27034130-27034273,27034358-27034439,
27034536-27034690,27034865-27034945,27035397-27035458,
27035966-27036034,27036807-27036867,27037560-27037816
Length = 337
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +2
Query: 62 NVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGEES 235
++P S+ S+ ++ T A L L+ P S+GR IPP LR ++S QG S
Sbjct: 23 SIPASSSSSSSSSSTTTAA----ASLPLRAAVPPSSGRRIPP-LRCASSSSSSQGSAS 75
>12_01_0630 - 5203802-5204111,5204896-5204900
Length = 104
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +3
Query: 489 TRASRRAREEDYEPPAPR--NDRWKEPEPRAEERSNSRWPSDDVR-RTRSRKDENDWTV 656
TR RR R+ PP+ R + R++ P PR+ E R +R +DW+V
Sbjct: 3 TRVRRRWRDGTLRPPSCRAISRRYRSPRPRSREDDTDRVDEQRLRVLAAGASPGDDWSV 61
>07_03_0537 - 19218461-19218982,19219482-19219868,19219993-19220154,
19220464-19221117,19221233-19221277,19223300-19223845,
19223930-19224307,19224642-19225313,19225373-19225456
Length = 1149
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 507 AREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDEN 644
A ++D PP R+D ++ + EE +W RR R R++E+
Sbjct: 1067 ADDDDAVPPKERSDEQQQQDEEEEEEEEQKW-----RRRRRREEED 1107
>02_02_0526 + 11185825-11186832,11187795-11187869
Length = 360
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +3
Query: 492 RASRRAREEDYEPP-----APRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTV 656
R+ RR R +PP AP D W EP+ EE + DD R R R + +
Sbjct: 56 RSPRRRRRRVRQPPEIVSAAPAVDCWHEPDQIEEEEED----DDDAREER-RARIRERAL 110
Query: 657 PLPRDERQELLL 692
L + E ++LLL
Sbjct: 111 LLRQHEEEQLLL 122
>05_03_0035 - 7592177-7592938
Length = 253
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 489 TRASRRAREEDYEP---PAPRNDRWKE--PEPRAEERSNSRWPSDDVRRTRSRKDENDWT 653
T+A ++ E YEP P P+ + E PEP+ E +S S+ R++ S+ +
Sbjct: 163 TKAEPKS-EPKYEPKSEPTPQTEPRAESQPEPKTEPKSESKAEPKPERKSYSKSKPEPES 221
Query: 654 VPLPRDERQ 680
P + ERQ
Sbjct: 222 KPEAKAERQ 230
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 492 RASRRAREE-DYEPPAPRNDRWKEPEPRAE-ERSNSRWPSDDVRRTRSRKDEND 647
R +AR+E + E R ++ K+ + R E ER + D + RSRKDE D
Sbjct: 743 REEEKARKEKEREEKERRKEKEKKEKERKEKERDKEKEREKDKGKDRSRKDEMD 796
>10_06_0062 - 10233885-10234082,10235868-10236004,10236103-10236424
Length = 218
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 486 PTRASRRAREEDYEPPAPRNDRWKEPEPRAE 578
P + + ++R+E+ P+P ++ EPEP E
Sbjct: 151 PAKVAAQSRQENPSSPSPTDEARPEPEPEPE 181
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +3
Query: 486 PTRASRRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKD 638
P+ R A +D PP R R P P+ E + R++R ++D
Sbjct: 158 PSPDPRDAAGKDLSPPRQRRRRQDTPSPKGSEVAGGHDDLSPPRKSRQQRD 208
>06_03_0411 - 20520823-20521674
Length = 283
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 528 PPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDE 641
PP +E E EER R P +R R+R DE
Sbjct: 48 PPVASQREEEEEEEEEEEREVKRSPPGTLRHRRTRSDE 85
>06_01_0169 - 1346281-1349188,1350069-1350184
Length = 1007
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 762 GLRWPQPVYPRIWRN*SRCCQCRTAIVPVVHRE 664
G+R+ + P + R CCQ R+ IV + H E
Sbjct: 898 GIRFEKDALPHMERMEIECCQLRSGIVGIKHLE 930
>01_07_0044 -
40701286-40701408,40701642-40701758,40702406-40702498,
40702598-40702717,40702932-40703048,40703202-40703297,
40703395-40703544,40703916-40704070,40704156-40704196,
40704275-40704357,40704827-40705264
Length = 510
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 493 GPRDVHVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLA 669
G V V+ N + G K R + K V L + LD+ TRM+GQ+ +LA
Sbjct: 373 GDIPVRVKNSYNPKAPGTLITKQREMD-KVVLTSIVLKSNVTMLDIVSTRMLGQFGFLA 430
>09_04_0377 + 17086775-17088310
Length = 511
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +3
Query: 477 RTGPTRAS--RRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDW 650
R P+R+ RR R D P R+ R + P P + R +W R R R E +W
Sbjct: 29 RRSPSRSPSPRRNRRRDRSPSPYRSRRDRSPSPYRDRR--RQW--SPYHRDRGRDVEREW 84
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 528 PPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPR 668
PP P + W +P R S W S+ + S ++ W VPL R
Sbjct: 323 PPIPSLNDWSQPPARGSTFYPSIWQSEADPKANS---DSRWRVPLCR 366
>01_05_0458 + 22432192-22432309,22433980-22434296
Length = 144
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 495 ASRRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSR 632
A+ A D PP P R P P E+R +W ++ R+ + R
Sbjct: 72 AAPAAETVDPTPPTPPPKRVLPPIPEDEQRQVYKWMLEEKRKIKPR 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,477,929
Number of Sequences: 37544
Number of extensions: 429639
Number of successful extensions: 1572
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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