Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0574.Seq
(777 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14281| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.084
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.084
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 31 1.4
SB_4588| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_35901| Best HMM Match : AT_hook (HMM E-Value=0.34) 30 1.8
SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55) 30 2.4
SB_2403| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 3.2
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 29 3.2
SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099) 29 4.2
SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6) 29 4.2
SB_33092| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_17736| Best HMM Match : Aconitase (HMM E-Value=5.2e-16) 29 4.2
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_10274| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_36059| Best HMM Match : TolA (HMM E-Value=0.1) 29 5.5
SB_17018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 29 5.5
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 29 5.5
SB_33538| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_13998| Best HMM Match : Kringle (HMM E-Value=0.0016) 28 9.7
SB_41280| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10) 28 9.7
>SB_14281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 34
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 690 LFGTGNTGINFSKYEDIPVEASG 758
LF + NTGINF KY+DIPVEA+G
Sbjct: 3 LFASHNTGINFEKYDDIPVEATG 25
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 34.7 bits (76), Expect = 0.084
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 11/56 (19%)
Frame = +2
Query: 77 SNMSNVTNQNGTGLEQQLAGLDLQ------PQAPKSTG-----RYIPPHLRRQLQA 211
S MS+V + N L+Q+ AGLDL P A ++ RYIPPHLR + Q+
Sbjct: 710 SVMSHVAHGNNQSLDQRFAGLDLNSGVGQSPDAGRNPNQPTQQRYIPPHLRGKQQS 765
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 34.7 bits (76), Expect = 0.084
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +3
Query: 363 RSRIRSATPAQGPRSRQWISEWRTRALE*IREME*S*TRTGPTRASRRAREEDYEPPAPR 542
R R RS + ++ PRSR + R+R+ + RE +R+ SRR+R Y P+P
Sbjct: 146 RRRYRSRSDSR-PRSR-YRGRSRSRSRDRYRERRPRKSRSKSLDRSRRSRSRSYSRPSPS 203
Query: 543 NDRWKEPEPRA-EERSNSRWPSDDVRRTRSRKDEND 647
R + R RS SR R R R+ D
Sbjct: 204 PYRSRRSRSRTRRSRSRSRRSRSRSRDRRPRRRSRD 239
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 477 RTGPTRASRRAREEDYEPPAPRNDR-WKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWT 653
R P+ RR R + Y P R D P PR +S S P RR+ S +
Sbjct: 888 RRSPSPPPRRRRRDSYSPSRRRRDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRS 947
Query: 654 VPLPRDERQ 680
PLP +R+
Sbjct: 948 SPLPPPQRK 956
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 489 TRASRRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRS 629
+R SRR+ P R+ P A +RS SR P +VRR S
Sbjct: 1085 SRGSRRSPSPPKREPRRRSPSASPPRREARKRSLSRSPKREVRRRGS 1131
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Frame = +3
Query: 498 SRRAREEDYEPPAPRNDRWKEPEPR-------AEERSNSRWPSDDVRRTRSRKDENDW 650
SR + EED E P +W+ P P A E+ +SR P D R T + K N+W
Sbjct: 294 SRSSWEED-ENSTPSRSKWEMPSPARSISDYIASEKRHSRHPDDTPRFTPTHK-YNEW 349
>SB_4588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 729
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 486 PTRASRRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDEND 647
P R+SRR R++D R +E E EER ++ R R RKD+ D
Sbjct: 112 PARSSRR-RDQDGSGYISSRRR-REVEKEEEERQREEEEEEERERARRRKDQED 163
>SB_35901| Best HMM Match : AT_hook (HMM E-Value=0.34)
Length = 394
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +3
Query: 489 TRASRRAREEDYEPPA--PRNDR-WKEPEPRAEERSNSRWPSDDVRRT-RSRKDENDWTV 656
+R +++ ++ D E PA PR R W + + + ++ +R P + +RT R ++++ +
Sbjct: 43 SRRAKKDQQADQERPARGPRKTRKWTKKDQQEDQERPARGPRETSKRTKRDQQEDQERPA 102
Query: 657 PLPRDERQ 680
PR R+
Sbjct: 103 GRPRKTRE 110
>SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55)
Length = 1087
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 573 AEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQEL 686
AEERS+ SD V DEN++ +P+P++ + +
Sbjct: 352 AEERSDQPRASDGVFNFAITHDENNYALPIPQERHKRM 389
>SB_2403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 573 AEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQEL 686
AEERS+ SD V DEN++ +P+P++ + +
Sbjct: 3 AEERSDQPRASDGVFNFAITHDENNYALPIPQERHKRM 40
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 654 VPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGD 761
+P + +LL +TGI F YE+IP + SG+
Sbjct: 437 IPPELPDNIDLLFQDAPHTGIKFDNYENIPSKVSGE 472
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 474 TRTGPTRASRRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWT 653
T P R S+ +REE+ + R D ++P P EER S+ + R R+ ++
Sbjct: 359 TSVSPLRRSKDSREEETQK---RVDAPRDPSPMEEERRQSQRATSKQRTNPDRRRKSSPP 415
Query: 654 VPLPRDERQ 680
+D Q
Sbjct: 416 SASEKDRNQ 424
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 474 TRTGPTRASRRAREEDYEP--PAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDEND 647
TR TR+SR++ + P +P +EP+PR S D R R++ +
Sbjct: 183 TRRSETRSSRQSNQRSSSPGDASPGRGGSREPKPRRNREGRQGGGSRD--RDSQRRERS- 239
Query: 648 WTVPLPRDERQ 680
VP R ER+
Sbjct: 240 -PVPERRQERR 249
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 657 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASGD 761
P P ++ +E+ T GINF KY+ I V SG+
Sbjct: 671 PTPTEDEEEMFR-STIQQGINFEKYDQIEVLVSGN 704
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 657 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASGD 761
P P ++ +E+ T GINF KY+ I V SG+
Sbjct: 94 PTPTEDEEEMFR-STIQQGINFEKYDQIEVLVSGN 127
>SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)
Length = 2489
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 540 RNDRWKEPEPRAEERSNSRWPSDDVRRTRSR-KDENDWTVPLPRDERQELLLFGTGNTGI 716
R +E E + +++ PS +R+T S K N+W+ +P + L TG+
Sbjct: 750 REQEEEEEEDVYVDGTDTILPSGQMRKTESAVKGNNEWSGAMPPTCSKRLQSLLTGHQDN 809
Query: 717 NFSKYEDIPVEASGD 761
FS ED E+S D
Sbjct: 810 RFSNEED-TFESSED 823
>SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6)
Length = 184
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/70 (35%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 474 TRTGPTRASRRAREEDYEPPAPRNDRWKE--PEPRAEERSNSRWPSDDVRRTRSRKDEND 647
T P R E DY PP PR++R P PR PS D R R
Sbjct: 7 TSRSPEREHLNGPERDY-PPPPRDERDSRGPPPPRDGRDIRGLPPSRDGRDIRG------ 59
Query: 648 WTVPLPRDER 677
+PLPRD R
Sbjct: 60 --LPLPRDGR 67
>SB_33092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 564 EPRAEERSNSR--WPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGT 701
E R++ R S WP D +R+D + WT L + +L FGT
Sbjct: 26 ECRSQNRPVSEVFWPKGDEPNQPNREDPDKWTTILASGYKMPMLGFGT 73
>SB_17736| Best HMM Match : Aconitase (HMM E-Value=5.2e-16)
Length = 391
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 634 KTRMIGQYRYLAMNDRNYCCSALATPG 714
K R+IG Y+ ++R CC +TPG
Sbjct: 354 KWRVIGDENYVECSNRGACCLGASTPG 380
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 28.7 bits (61), Expect = 5.5
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = +3
Query: 489 TRASRRAREE-DYEPPAPRND---RWKEPEPRAEERSNSRWPSDDVRRTRSRKDEN-DWT 653
T RR EE DY ++D R E EP +ERS S + R + R+D DW
Sbjct: 265 TPQKRRPMEEPDYRSLPVQDDVRSRSVEGEPARKERS-----SPERRMGKQRRDVPLDWE 319
Query: 654 VPLPR--DER 677
PLPR DER
Sbjct: 320 EPLPRHVDER 329
>SB_10274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 844
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 477 RTGPTRASRRAREEDYEPPAPRNDRWKEPEPRAEE 581
RT P++ASR ARE D+EP W + R EE
Sbjct: 273 RTLPSKASRDAREYDFEPWTSTTLAWDNID-RLEE 306
>SB_36059| Best HMM Match : TolA (HMM E-Value=0.1)
Length = 1936
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 525 EPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDEND 647
+P AP+ ++ KEPEP A++ + + R+++ +D++D
Sbjct: 1537 DPNAPQGEKPKEPEPEADKPAEK--SQEHSRKSQRGRDKDD 1575
>SB_17018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 144 KSRPASCCSRPVPFWLVTLLILLPSGTFFWELCSKNI*NTVYNE 13
KS P +C S P+ L+ LL +LP W+L S + T N+
Sbjct: 255 KSTPRNCGSCPIKE-LLPLLKVLPFNVLLWQLFSPSAPQTTVNK 297
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Frame = +3
Query: 513 EEDYEPPA---PRNDRWKEPEPRAEERSNSRWPSDDVRRTRSR-KDENDWTVP----LPR 668
EE+ E PA P+ +W+E AE++ N D +R R R ++E+ VP P
Sbjct: 1378 EEEEEEPAIVLPKKSKWEESNLSAEQQLNK---LDGIRPLRKRAREESPLLVPDDDDDPY 1434
Query: 669 DERQELLLFG 698
DE+++ + G
Sbjct: 1435 DEKEDDMRIG 1444
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +3
Query: 492 RASRRAREE-DYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDE--NDWTVPL 662
R +R R+E D PR++ + E R + + R P DD R R R+D+ + P
Sbjct: 1773 RRGKRPRDEYDRRGERPRDEYDRRGE-RPRDEYDRRGPRDDQREERPRRDDERREERPPR 1831
Query: 663 PR---DERQE 683
PR D R E
Sbjct: 1832 PRSGMDRRDE 1841
>SB_33538| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 474 TRTGP-TRASRRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDEND 647
TR P TR R R + P RND W + +PR SR +D R + ND
Sbjct: 192 TRNDPRTRNDPRTRND----PRTRNDPWTQNDPRTRNDPRSR---NDPRTRNDPRTRND 243
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRD 671
R S +RE E + +R K P R ERS R S D R R+R+ + RD
Sbjct: 249 RKSSSSRESKRERRS--EEREKRPRSRERERSRDRERSRDRERDRTREKSPEREKDRDRD 306
Query: 672 ERQELL 689
+E L
Sbjct: 307 LDEEEL 312
>SB_13998| Best HMM Match : Kringle (HMM E-Value=0.0016)
Length = 832
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRD 671
R +RAR ED R++R ++ E R +ER R DD R+ K + L D
Sbjct: 683 RVKKRARRED-----SRDERRRKRE-RRDERRRKRGAEDDRRKRAKEKKRQMYDKGLSSD 736
Query: 672 ERQ 680
R+
Sbjct: 737 ARR 739
>SB_41280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 537 PRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPR 668
PR R K+P R + R+ T SR E WT LPR
Sbjct: 315 PRRSRLKKPISR-NSLATDRFSYTSFLTTASRISEESWTPDLPR 357
>SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10)
Length = 460
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 87 VMLPTKMEQV*SSSLLVWTCSPRLLRVLVATYPRICVGSCR 209
VM+ + +V +LV+TCS L V AT P + G CR
Sbjct: 343 VMMAEVISEV-MKKILVFTCSGDLGHVTSATSPEVEEGDCR 382
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,914,643
Number of Sequences: 59808
Number of extensions: 447864
Number of successful extensions: 1467
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -