Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0574.Seq
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    38   3e-04
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    32   0.023
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              30   0.070
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    27   0.86 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   1.1  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   2.6  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   4.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   6.0  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 38.3 bits (85), Expect = 3e-04
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 600 PSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTG-NTGINFSKYEDIPVEASGD 761
           PS D  + ++ K    +  PLP ++  E L+FG+G ++GINF K+E+I V  SG+
Sbjct: 117 PSMD--QVKTDKPRELYIPPLPTED--ESLIFGSGISSGINFDKFEEIQVRVSGE 167


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 31.9 bits (69), Expect = 0.023
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +2

Query: 47  QSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQG 226
           Q  Q+  P     + V     +  ++QL     Q Q  +   RY+PP LR+Q Q    Q 
Sbjct: 408 QQQQQQQPQQLLWTTVVRSCPSQRQRQLQQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQ 467

Query: 227 EESKR 241
           ++ +R
Sbjct: 468 QQQQR 472



 Score = 27.1 bits (57), Expect = 0.65
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 146 QPQAPKSTGRYIPPHLRRQLQATSDQGEESKR 241
           Q Q  +   RY+PP LR+Q Q    Q ++ ++
Sbjct: 287 QQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQ 318



 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 146 QPQAPKSTGRYIPPHLRRQLQ 208
           Q Q  +   RY+PP LR+Q Q
Sbjct: 254 QQQQQQQGERYVPPQLRQQRQ 274


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 30.3 bits (65), Expect = 0.070
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 146 QPQAPKS-TGRYIPPHLRRQLQATSDQGEESK 238
           QPQ  +  TGRY PP +R+QLQ    Q +  +
Sbjct: 328 QPQQQQQQTGRYQPPQMRQQLQQQQQQRQPQR 359


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 16/50 (32%), Positives = 19/50 (38%)
 Frame = +3

Query: 528  PPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDER 677
            PP P   R   P PR  E    R     ++  R R+D     VP  R  R
Sbjct: 1107 PPIPPRSRRLPPSPRTTEMRRRRRNYMQLQYRRRRRDGELGDVPQGRQRR 1156


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +2

Query: 119 EQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGEESKRSSLDTVLV 265
           +QQL     Q Q  +   RY+PP LR+Q      + ++  R   D + V
Sbjct: 270 QQQLQRRQQQQQQHQGQ-RYVPPQLRQQAHQQQQRQQQKVRPRPDKIEV 317


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 165 LLGAWGCKSRPASCCSRPVPFWLVTLLI 82
           ++G WG  S    CC++P   +   L +
Sbjct: 543 IIGKWGIISTAQKCCNKPCNIFQAVLSV 570


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 493 RVGPVRVHDHSISRIHSNALVRHSEIHCLDRGPCAGVAL 377
           R+  +++HD+ IS +   AL   +E+  LD      VAL
Sbjct: 270 RLKMLKIHDNEISMVGDKALSGLNELQILDLSSNKLVAL 308


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 513  EEDYEPPAPRNDRWKEPEPRAEERSNSRWPSDD 611
            EED  PPAP     K  E     R++ + P  +
Sbjct: 1532 EEDIVPPAPATATTKSVEREEPVRASGKAPESE 1564


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +3

Query: 474  TRTGPTRASRRAREEDY---EPPAPRNDRWKEPEPRAEERSNSR 596
            TR    RA+ + R+ +     PP+PR +R +E    A  R   R
Sbjct: 1061 TRNAARRAATQQRQAERLPPPPPSPRTERRREVNRLAVARLRER 1104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,883
Number of Sequences: 2352
Number of extensions: 15170
Number of successful extensions: 39
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)