Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0574.Seq
(777 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2 p... 68 3e-11
BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 68 3e-11
AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 68 3e-11
AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase D... 68 3e-11
AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform pro... 68 3e-11
AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform pro... 68 3e-11
AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 68 3e-11
BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein. 63 9e-10
AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform pro... 63 9e-10
AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform pro... 63 9e-10
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 33 0.87
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 33 0.87
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 0.87
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 33 0.87
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 33 0.87
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 0.87
BC088362-1|AAH88362.1| 724|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 3.5
BC047455-1|AAH47455.1| 690|Homo sapiens DDX4 protein protein. 31 3.5
AY004154-1|AAF86585.1| 724|Homo sapiens DEAD box RNA helicase p... 31 3.5
AL137462-1|CAB70750.1| 635|Homo sapiens hypothetical protein pr... 31 3.5
AF262962-1|AAF72705.1| 724|Homo sapiens VASA protein protein. 31 3.5
X16707-1|CAA34679.1| 271|Homo sapiens protein ( Human fra-1 mRN... 31 4.6
CR542278-1|CAG47074.1| 271|Homo sapiens FOSL1 protein. 31 4.6
CR542257-1|CAG47053.1| 271|Homo sapiens FOSL1 protein. 31 4.6
BC016648-1|AAH16648.1| 271|Homo sapiens FOS-like antigen 1 prot... 31 4.6
AK222902-1|BAD96622.1| 271|Homo sapiens FOS-like antigen 1 vari... 31 4.6
AJ297411-1|CAC50237.1| 271|Homo sapiens fos related antigen 1 p... 31 4.6
AK124395-1|BAC85845.1| 1235|Homo sapiens protein ( Homo sapiens ... 31 6.1
AB033071-1|BAA86559.2| 1377|Homo sapiens KIAA1245 protein protein. 31 6.1
Y09615-1|CAA70830.1| 399|Homo sapiens mTERF protein. 30 8.1
U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation fa... 30 8.1
U58047-1|AAB41586.1| 466|Homo sapiens p167 protein. 30 8.1
U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein. 30 8.1
U10991-1|AAA21253.1| 1692|Homo sapiens G2 protein. 30 8.1
D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein. 30 8.1
BC130391-1|AAI30392.1| 399|Homo sapiens mitochondrial transcrip... 30 8.1
BC130389-1|AAI30390.1| 399|Homo sapiens mitochondrial transcrip... 30 8.1
BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation ... 30 8.1
BC108648-1|AAI08649.1| 399|Homo sapiens mitochondrial transcrip... 30 8.1
BC000965-1|AAH00965.1| 399|Homo sapiens mitochondrial transcrip... 30 8.1
AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation ... 30 8.1
AK222730-1|BAD96450.1| 399|Homo sapiens mitochondrial transcrip... 30 8.1
AC003086-1|AAB83941.1| 399|Homo sapiens mitochondrial transcrip... 30 8.1
>U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2
protein.
Length = 662
Score = 68.1 bits (159), Expect = 3e-11
Identities = 38/81 (46%), Positives = 46/81 (56%)
Frame = +3
Query: 519 DYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFG 698
DY+ R DR + E NSRW + DE+DW+ PLP ER E LF
Sbjct: 103 DYDGIGSRGDR--SGFGKFERGGNSRWCD--------KSDEDDWSKPLPPSERLEQELFS 152
Query: 699 TGNTGINFSKYEDIPVEASGD 761
GNTGINF KY+DIPVEA+G+
Sbjct: 153 GGNTGINFEKYDDIPVEATGN 173
Score = 43.6 bits (98), Expect = 8e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +2
Query: 83 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 202
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 68.1 bits (159), Expect = 3e-11
Identities = 38/81 (46%), Positives = 46/81 (56%)
Frame = +3
Query: 519 DYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFG 698
DY+ R DR + E NSRW + DE+DW+ PLP ER E LF
Sbjct: 103 DYDGIGSRGDR--SGFGKFERGGNSRWCD--------KSDEDDWSKPLPPSERLEQELFS 152
Query: 699 TGNTGINFSKYEDIPVEASGD 761
GNTGINF KY+DIPVEA+G+
Sbjct: 153 GGNTGINFEKYDDIPVEATGN 173
Score = 43.6 bits (98), Expect = 8e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +2
Query: 83 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 202
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 68.1 bits (159), Expect = 3e-11
Identities = 38/81 (46%), Positives = 46/81 (56%)
Frame = +3
Query: 519 DYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFG 698
DY+ R DR + E NSRW + DE+DW+ PLP ER E LF
Sbjct: 103 DYDGIGSRGDR--SGFGKFERGGNSRWCD--------KSDEDDWSKPLPPSERLEQELFS 152
Query: 699 TGNTGINFSKYEDIPVEASGD 761
GNTGINF KY+DIPVEA+G+
Sbjct: 153 GGNTGINFEKYDDIPVEATGN 173
Score = 43.6 bits (98), Expect = 8e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +2
Query: 83 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 202
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase DDX3
protein.
Length = 662
Score = 68.1 bits (159), Expect = 3e-11
Identities = 38/81 (46%), Positives = 46/81 (56%)
Frame = +3
Query: 519 DYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFG 698
DY+ R DR + E NSRW + DE+DW+ PLP ER E LF
Sbjct: 103 DYDGIGSRGDR--SGFGKFERGGNSRWCD--------KSDEDDWSKPLPPSERLEQELFS 152
Query: 699 TGNTGINFSKYEDIPVEASGD 761
GNTGINF KY+DIPVEA+G+
Sbjct: 153 GGNTGINFEKYDDIPVEATGN 173
Score = 43.6 bits (98), Expect = 8e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +2
Query: 83 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 202
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 68.1 bits (159), Expect = 3e-11
Identities = 38/81 (46%), Positives = 46/81 (56%)
Frame = +3
Query: 519 DYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFG 698
DY+ R DR + E NSRW + DE+DW+ PLP ER E LF
Sbjct: 103 DYDGIGSRGDR--SGFGKFERGGNSRWCD--------KSDEDDWSKPLPPSERLEQELFS 152
Query: 699 TGNTGINFSKYEDIPVEASGD 761
GNTGINF KY+DIPVEA+G+
Sbjct: 153 GGNTGINFEKYDDIPVEATGN 173
Score = 43.6 bits (98), Expect = 8e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +2
Query: 83 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 202
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 68.1 bits (159), Expect = 3e-11
Identities = 38/81 (46%), Positives = 46/81 (56%)
Frame = +3
Query: 519 DYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFG 698
DY+ R DR + E NSRW + DE+DW+ PLP ER E LF
Sbjct: 103 DYDGIGSRGDR--SGFGKFERGGNSRWCD--------KSDEDDWSKPLPPSERLEQELFS 152
Query: 699 TGNTGINFSKYEDIPVEASGD 761
GNTGINF KY+DIPVEA+G+
Sbjct: 153 GGNTGINFEKYDDIPVEATGN 173
Score = 43.6 bits (98), Expect = 8e-04
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +2
Query: 83 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 202
MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 3 variant protein.
Length = 674
Score = 68.1 bits (159), Expect = 3e-11
Identities = 38/81 (46%), Positives = 46/81 (56%)
Frame = +3
Query: 519 DYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFG 698
DY+ R DR + E NSRW + DE+DW+ PLP ER E LF
Sbjct: 115 DYDGIGSRGDR--SGFGKFERGGNSRWCD--------KSDEDDWSKPLPPSERLEQELFS 164
Query: 699 TGNTGINFSKYEDIPVEASGD 761
GNTGINF KY+DIPVEA+G+
Sbjct: 165 GGNTGINFEKYDDIPVEATGN 185
Score = 45.2 bits (102), Expect = 3e-04
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = +2
Query: 77 SNMSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 202
S MS+V +N GL+QQ AGLDL + S GRYIPPHLR +
Sbjct: 11 SGMSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 58
>BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein.
Length = 660
Score = 63.3 bits (147), Expect = 9e-10
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +3
Query: 570 RAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVE 749
R E +SRW V E+DW+ PLP ER E LF GNTGINF KY+DIPVE
Sbjct: 116 RFERSGHSRWCDKSV--------EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVE 167
Query: 750 ASG 758
A+G
Sbjct: 168 ATG 170
Score = 39.5 bits (88), Expect = 0.013
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +2
Query: 83 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 202
MS+V +N L+QQLA LDL + + S GRYIPPHLR +
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNR 46
>AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 63.3 bits (147), Expect = 9e-10
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +3
Query: 570 RAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVE 749
R E +SRW V E+DW+ PLP ER E LF GNTGINF KY+DIPVE
Sbjct: 116 RFERSGHSRWCDKSV--------EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVE 167
Query: 750 ASG 758
A+G
Sbjct: 168 ATG 170
Score = 39.5 bits (88), Expect = 0.013
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +2
Query: 83 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 202
MS+V +N L+QQLA LDL + + S GRYIPPHLR +
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNK 46
>AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 63.3 bits (147), Expect = 9e-10
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +3
Query: 570 RAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVE 749
R E +SRW V E+DW+ PLP ER E LF GNTGINF KY+DIPVE
Sbjct: 116 RFERSGHSRWCDKSV--------EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVE 167
Query: 750 ASG 758
A+G
Sbjct: 168 ATG 170
Score = 39.5 bits (88), Expect = 0.013
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +2
Query: 83 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQ 202
MS+V +N L+QQLA LDL + + S GRYIPPHLR +
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNK 46
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 33.5 bits (73), Expect = 0.87
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 363 RSRIRSATPAQGPRSR-QWISEWRTRALE*IREME*S*TRTGPTRASRRAREEDYEPPAP 539
R R RS TPA+ RSR + + R+R +R S P R S R+R PA
Sbjct: 601 RRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRS---RSPARRSGRSRS---RTPA- 653
Query: 540 RNDRWKEPEPRAEERSNSRWPSDDVRRTRSR 632
R R + P RS SR P+ R+RSR
Sbjct: 654 RRGRSRSRTPARRGRSRSRTPARRSGRSRSR 684
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 33.5 bits (73), Expect = 0.87
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 363 RSRIRSATPAQGPRSR-QWISEWRTRALE*IREME*S*TRTGPTRASRRAREEDYEPPAP 539
R R RS TPA+ RSR + + R+R +R S P R S R+R PA
Sbjct: 601 RRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRS---RSPARRSGRSRS---RTPA- 653
Query: 540 RNDRWKEPEPRAEERSNSRWPSDDVRRTRSR 632
R R + P RS SR P+ R+RSR
Sbjct: 654 RRGRSRSRTPARRGRSRSRTPARRSGRSRSR 684
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 33.5 bits (73), Expect = 0.87
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 363 RSRIRSATPAQGPRSR-QWISEWRTRALE*IREME*S*TRTGPTRASRRAREEDYEPPAP 539
R R RS TPA+ RSR + + R+R +R S P R S R+R PA
Sbjct: 601 RRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRS---RSPARRSGRSRS---RTPA- 653
Query: 540 RNDRWKEPEPRAEERSNSRWPSDDVRRTRSR 632
R R + P RS SR P+ R+RSR
Sbjct: 654 RRGRSRSRTPARRGRSRSRTPARRSGRSRSR 684
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 33.5 bits (73), Expect = 0.87
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 363 RSRIRSATPAQGPRSR-QWISEWRTRALE*IREME*S*TRTGPTRASRRAREEDYEPPAP 539
R R RS TPA+ RSR + + R+R +R S P R S R+R PA
Sbjct: 566 RRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRS---RSPARRSGRSRS---RTPA- 618
Query: 540 RNDRWKEPEPRAEERSNSRWPSDDVRRTRSR 632
R R + P RS SR P+ R+RSR
Sbjct: 619 RRGRSRSRTPARRGRSRSRTPARRSGRSRSR 649
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 33.5 bits (73), Expect = 0.87
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 363 RSRIRSATPAQGPRSR-QWISEWRTRALE*IREME*S*TRTGPTRASRRAREEDYEPPAP 539
R R RS TPA+ RSR + + R+R +R S P R S R+R PA
Sbjct: 391 RRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRS---RSPARRSGRSRS---RTPA- 443
Query: 540 RNDRWKEPEPRAEERSNSRWPSDDVRRTRSR 632
R R + P RS SR P+ R+RSR
Sbjct: 444 RRGRSRSRTPARRGRSRSRTPARRSGRSRSR 474
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 33.5 bits (73), Expect = 0.87
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 363 RSRIRSATPAQGPRSR-QWISEWRTRALE*IREME*S*TRTGPTRASRRAREEDYEPPAP 539
R R RS TPA+ RSR + + R+R +R S P R S R+R PA
Sbjct: 649 RRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRS---RSPARRSGRSRS---RTPA- 701
Query: 540 RNDRWKEPEPRAEERSNSRWPSDDVRRTRSR 632
R R + P RS SR P+ R+RSR
Sbjct: 702 RRGRSRSRTPARRGRSRSRTPARRSGRSRSR 732
>BC088362-1|AAH88362.1| 724|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 4 protein.
Length = 724
Score = 31.5 bits (68), Expect = 3.5
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 657 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASG 758
P P DE +F TGINF KY+ I VE SG
Sbjct: 250 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSG 280
>BC047455-1|AAH47455.1| 690|Homo sapiens DDX4 protein protein.
Length = 690
Score = 31.5 bits (68), Expect = 3.5
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 657 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASG 758
P P DE +F TGINF KY+ I VE SG
Sbjct: 216 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSG 246
>AY004154-1|AAF86585.1| 724|Homo sapiens DEAD box RNA helicase
protein.
Length = 724
Score = 31.5 bits (68), Expect = 3.5
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 657 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASG 758
P P DE +F TGINF KY+ I VE SG
Sbjct: 250 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSG 280
>AL137462-1|CAB70750.1| 635|Homo sapiens hypothetical protein
protein.
Length = 635
Score = 31.5 bits (68), Expect = 3.5
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 657 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASG 758
P P DE +F TGINF KY+ I VE SG
Sbjct: 161 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSG 191
>AF262962-1|AAF72705.1| 724|Homo sapiens VASA protein protein.
Length = 724
Score = 31.5 bits (68), Expect = 3.5
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 657 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASG 758
P P DE +F TGINF KY+ I VE SG
Sbjct: 250 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSG 280
>X16707-1|CAA34679.1| 271|Homo sapiens protein ( Human fra-1 mRNA.
).
Length = 271
Score = 31.1 bits (67), Expect = 4.6
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 483 GPTRASRRAREEDYEPPAPRND--RWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTV 656
GP+ R Y PP PR R P P R + ++ R R R++ N
Sbjct: 60 GPSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAA 119
Query: 657 PLPRDERQELLLF 695
R+ R+EL F
Sbjct: 120 AKCRNRRKELTDF 132
>CR542278-1|CAG47074.1| 271|Homo sapiens FOSL1 protein.
Length = 271
Score = 31.1 bits (67), Expect = 4.6
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 483 GPTRASRRAREEDYEPPAPRND--RWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTV 656
GP+ R Y PP PR R P P R + ++ R R R++ N
Sbjct: 60 GPSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAA 119
Query: 657 PLPRDERQELLLF 695
R+ R+EL F
Sbjct: 120 AKCRNRRKELTDF 132
>CR542257-1|CAG47053.1| 271|Homo sapiens FOSL1 protein.
Length = 271
Score = 31.1 bits (67), Expect = 4.6
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 483 GPTRASRRAREEDYEPPAPRND--RWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTV 656
GP+ R Y PP PR R P P R + ++ R R R++ N
Sbjct: 60 GPSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAA 119
Query: 657 PLPRDERQELLLF 695
R+ R+EL F
Sbjct: 120 AKCRNRRKELTDF 132
>BC016648-1|AAH16648.1| 271|Homo sapiens FOS-like antigen 1
protein.
Length = 271
Score = 31.1 bits (67), Expect = 4.6
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 483 GPTRASRRAREEDYEPPAPRND--RWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTV 656
GP+ R Y PP PR R P P R + ++ R R R++ N
Sbjct: 60 GPSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAA 119
Query: 657 PLPRDERQELLLF 695
R+ R+EL F
Sbjct: 120 AKCRNRRKELTDF 132
>AK222902-1|BAD96622.1| 271|Homo sapiens FOS-like antigen 1 variant
protein.
Length = 271
Score = 31.1 bits (67), Expect = 4.6
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 483 GPTRASRRAREEDYEPPAPRND--RWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTV 656
GP+ R Y PP PR R P P R + ++ R R R++ N
Sbjct: 60 GPSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAA 119
Query: 657 PLPRDERQELLLF 695
R+ R+EL F
Sbjct: 120 AKCRNRRKELTDF 132
>AJ297411-1|CAC50237.1| 271|Homo sapiens fos related antigen 1
protein.
Length = 271
Score = 31.1 bits (67), Expect = 4.6
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 483 GPTRASRRAREEDYEPPAPRND--RWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTV 656
GP+ R Y PP PR R P P R + ++ R R R++ N
Sbjct: 60 GPSSYPRPLTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAA 119
Query: 657 PLPRDERQELLLF 695
R+ R+EL F
Sbjct: 120 AKCRNRRKELTDF 132
>AK124395-1|BAC85845.1| 1235|Homo sapiens protein ( Homo sapiens
cDNA FLJ42404 fis, clone ASTRO3000301, highly similar
to Human G2 protein. ).
Length = 1235
Score = 30.7 bits (66), Expect = 6.1
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +3
Query: 486 PTRASRRAREEDYEPPAPRNDRWKEPEPRAEERSNS--RWPSDDVRRTRSRKDENDWTVP 659
P + A D PPA R+ P S + RW D V + +E + T+P
Sbjct: 224 PEMPTLPAEGSDGSPPATRDLLLSSKVPNLLSTSWTFPRWKKDSVTAILGKNEEANVTIP 283
Query: 660 LPRDERQELLLFGTGN 707
L R+E+L T N
Sbjct: 284 LQAFPRKEVLSLHTVN 299
>AB033071-1|BAA86559.2| 1377|Homo sapiens KIAA1245 protein protein.
Length = 1377
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDR--WKEPEPRAEERSNSRWPS 605
R R+ EED PP PR R E EP + S RW S
Sbjct: 425 RRGRKEGEEDQNPPCPRLSRELLAEKEPEVLQDSLDRWYS 464
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDR--WKEPEPRAEERSNSRWPS 605
R R+ EED PP PR R E EP + S RW S
Sbjct: 744 RRGRKEGEEDQNPPCPRLSRELLAEKEPEVLQDSLDRWYS 783
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDR--WKEPEPRAEERSNSRWPS 605
R R+ EED PP PR R E EP + S RW S
Sbjct: 1063 RRGRKEGEEDQNPPCPRLSRELLAEKEPEVLQDSLDRWYS 1102
>Y09615-1|CAA70830.1| 399|Homo sapiens mTERF protein.
Length = 399
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +1
Query: 508 HVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 684
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation factor
3 large subunit protein.
Length = 1382
Score = 30.3 bits (65), Expect = 8.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDRWKEPEPRAE-ERSNSRWPSD----DVRRTRSRKDENDWT 653
R R PPA DR ++ + E E+ + W ++ +RRT++ DE+ WT
Sbjct: 1320 RVEERDPPRRVPPPALSRDRERDRDREREGEKEKASWRAEKDRESLRRTKNETDEDGWT 1378
>U58047-1|AAB41586.1| 466|Homo sapiens p167 protein.
Length = 466
Score = 30.3 bits (65), Expect = 8.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDRWKEPEPRAE-ERSNSRWPSD----DVRRTRSRKDENDWT 653
R R PPA DR ++ + E E+ + W ++ +RRT++ DE+ WT
Sbjct: 404 RVEERDPPRRVPPPALSRDRERDRDREREGEKEKASWRAEKDRESLRRTKNETDEDGWT 462
>U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein.
Length = 1382
Score = 30.3 bits (65), Expect = 8.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDRWKEPEPRAE-ERSNSRWPSD----DVRRTRSRKDENDWT 653
R R PPA DR ++ + E E+ + W ++ +RRT++ DE+ WT
Sbjct: 1320 RVEERDPPRRVPPPALSRDRERDRDREREGEKEKASWRAEKDRESLRRTKNETDEDGWT 1378
>U10991-1|AAA21253.1| 1692|Homo sapiens G2 protein.
Length = 1692
Score = 30.3 bits (65), Expect = 8.1
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +3
Query: 486 PTRASRRAREEDYEPPAPRNDRWKEPEPRAEERSNS--RWPSDDVRRTRSRKDENDWTVP 659
P + A D PPA R+ P S + RW D V + +E + T+P
Sbjct: 65 PEMPTLPAEGSDGSPPATRDLLLSSKVPNLLSTSWTFPRWKKDSVTAILGKNEEANVTIP 124
Query: 660 LPRDERQELLLFGTGN 707
L R+E+L T N
Sbjct: 125 LQGFPRKEVLSLHTVN 140
>D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein.
Length = 1388
Score = 30.3 bits (65), Expect = 8.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDRWKEPEPRAE-ERSNSRWPSD----DVRRTRSRKDENDWT 653
R R PPA DR ++ + E E+ + W ++ +RRT++ DE+ WT
Sbjct: 1326 RVEERDPPRRVPPPALSRDRERDRDREREGEKEKASWRAEKDRESLRRTKNETDEDGWT 1384
>BC130391-1|AAI30392.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +1
Query: 508 HVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 684
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BC130389-1|AAI30390.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +1
Query: 508 HVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 684
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation
initiation factor 3, subunit A protein.
Length = 1382
Score = 30.3 bits (65), Expect = 8.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDRWKEPEPRAE-ERSNSRWPSD----DVRRTRSRKDENDWT 653
R R PPA DR ++ + E E+ + W ++ +RRT++ DE+ WT
Sbjct: 1320 RVEERDPPRRVPPPALSRDRERDRDREREGEKEKASWRAEKDRESLRRTKNETDEDGWT 1378
>BC108648-1|AAI08649.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +1
Query: 508 HVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 684
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BC000965-1|AAH00965.1| 399|Homo sapiens mitochondrial
transcription termination factor, precursor protein.
Length = 399
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +1
Query: 508 HVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 684
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation
initiation factor 3, subunit 10 theta, 150/170kDa
protein.
Length = 1382
Score = 30.3 bits (65), Expect = 8.1
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 492 RASRRAREEDYEPPAPRNDRWKEPEPRAE-ERSNSRWPSD----DVRRTRSRKDENDWT 653
R R PPA DR ++ + E E+ + W ++ +RRT++ DE+ WT
Sbjct: 1320 RVEERDPPRRVPPPALSRDRERDRDREREGEKEKASWRAEKDRESLRRTKNETDEDGWT 1378
>AK222730-1|BAD96450.1| 399|Homo sapiens mitochondrial
transcription termination factor precursor variant
protein.
Length = 399
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +1
Query: 508 HVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 684
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>AC003086-1|AAB83941.1| 399|Homo sapiens mitochondrial
transcription terminator factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +1
Query: 508 HVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 684
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,949,018
Number of Sequences: 237096
Number of extensions: 2251010
Number of successful extensions: 6845
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 6121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6793
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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