Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0573.Seq
         (584 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0841 - 28104977-28105142,28105439-28105502,28105586-281056...    35   0.041
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813...    35   0.041
12_02_0893 + 24077634-24078379,24079347-24080412,24080741-240808...    32   0.39 
01_05_0451 - 22361617-22361811,22362728-22362842,22363443-223635...    28   4.8  
11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779...    28   6.3  
11_01_0609 - 4865229-4865510,4865981-4866144,4866219-4866320,486...    28   6.3  
01_04_0064 - 15600467-15600528,15600606-15600647,15600732-156011...    28   6.3  
09_04_0097 - 14573499-14574110,14574977-14575017,14575424-145756...    27   8.3  
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879...    27   8.3  
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046...    27   8.3  

>03_05_0841 -
           28104977-28105142,28105439-28105502,28105586-28105655,
           28105743-28105852,28106217-28106295,28106610-28106691,
           28106791-28106879,28107351-28107425,28107728-28107862,
           28108018-28108163,28108380-28108491
          Length = 375

 Score = 35.1 bits (77), Expect = 0.041
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 363 SRCKTEWYCGRECQVQQWPKHKELC 437
           S C+  WYCG  CQ ++W  H+  C
Sbjct: 73  SVCRVAWYCGSACQREEWKLHQLEC 97


>02_02_0236 +
           8135641-8135795,8136167-8136557,8136640-8136931,
           8137117-8137271,8137363-8137451,8137623-8137967,
           8139046-8139169,8139424-8139581,8139673-8139757,
           8140094-8140306,8141314-8141375,8141466-8141951,
           8142472-8142568
          Length = 883

 Score = 35.1 bits (77), Expect = 0.041
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +3

Query: 363 SRCKTEWYCGRECQVQQWPK-HKELCDQY 446
           SRCK+  YC  +CQ+  W + HK+ C Q+
Sbjct: 44  SRCKSVRYCSGKCQIIHWRQGHKQTCQQW 72


>12_02_0893 +
           24077634-24078379,24079347-24080412,24080741-24080866,
           24081278-24081384,24081720-24081744
          Length = 689

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
 Frame = -3

Query: 255 SRIFRTVHAKIF-ELGFR**FSSFVYLLHVRI-LYLWNNFNESAPWVLNAIGPIVKSGVI 82
           SR+  TV+  ++ E G      +++ L++V + LYL+  F     W+L ++ P++K+GV 
Sbjct: 603 SRVNATVYLYLYGEFGL----VAWILLVNVTVYLYLYGEFG-FVVWILLSVIPLIKNGVD 657

Query: 81  AHREPAKERLQFA 43
                A  RL F+
Sbjct: 658 HKSSSASSRLAFS 670


>01_05_0451 -
           22361617-22361811,22362728-22362842,22363443-22363513,
           22363600-22363754,22363843-22363933,22364049-22364104,
           22364910-22365027,22365087-22365200,22365289-22365504
          Length = 376

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 363 SRCKTEWYCGRECQVQQW-PKHKELCDQ 443
           SRC+   YC ++ Q   W  KHK  C Q
Sbjct: 155 SRCRKSSYCSKKHQELHWRAKHKNECHQ 182


>11_06_0578 +
           25176304-25176388,25176503-25177032,25177267-25177997,
           25178122-25178172,25178562-25178813,25178894-25179004,
           25179102-25179183,25179460-25179489
          Length = 623

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 136 LIEVVPQIKDAYVKQIHKRTKSLAKTQL 219
           L+   PQ K+ YVK +HKR K    T L
Sbjct: 503 LVGKTPQEKEEYVKTLHKRKKLEVATYL 530


>11_01_0609 -
           4865229-4865510,4865981-4866144,4866219-4866320,
           4866674-4867217
          Length = 363

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 368 MQDRVVLWKRMSSATVAETQRTLR 439
           M+DRVV++K+ S A V E+ R  R
Sbjct: 139 MEDRVVVFKKSSEANVCESSRRKR 162


>01_04_0064 -
           15600467-15600528,15600606-15600647,15600732-15601107,
           15601186-15601447,15602992-15603158,15603344-15603484,
           15603575-15603643
          Length = 372

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -1

Query: 272 KFLRHFLESSEPSMRKYSSWVFANDLVRLCICFTYASFI--CG 150
           KF+ ++L + E       +W  AND +R  +C  + S +  CG
Sbjct: 101 KFISNYLATLEAPELTQEAWNLANDSLRTTLCVRFKSEVVACG 143


>09_04_0097 -
           14573499-14574110,14574977-14575017,14575424-14575616,
           14575697-14575837,14575970-14576197,14576297-14576552,
           14576866-14577069,14577157-14577245,14577346-14577416,
           14577498-14577579,14577653-14577715,14578018-14578155
          Length = 705

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -3

Query: 135 SAPWVLNAIGPIVKSGVIAHREPAKERLQFAERWNLIQH 19
           SA W L  + PI++S  IA   P   RL F +    IQH
Sbjct: 202 SASWYLENVSPILQSYGIAAIAPFSHRLAFDDLPVDIQH 240


>08_02_1014 -
           23586552-23587224,23587402-23587463,23587735-23587950,
           23588125-23588209,23589232-23589389,23589505-23589625,
           23590081-23590243,23590330-23590415,23590660-23590742,
           23590816-23591677,23593266-23593693
          Length = 978

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +3

Query: 366 RCKTEWYCGRECQVQQWPK-HKELC 437
           +CK   YC  +CQ+  W + HK  C
Sbjct: 136 QCKAVKYCSFKCQIAHWRQGHKNEC 160


>06_03_0968 -
           26402154-26403834,26404322-26404383,26404473-26404682,
           26404776-26404860,26405461-26405618,26405745-26405868,
           26405955-26406123,26406202-26406287,26406379-26406467,
           26406564-26406735,26407820-26408193
          Length = 1069

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +3

Query: 363 SRCKTEWYCGRECQVQQWPK-HKELCDQ 443
           S CK   YC + CQ + W   HK  C Q
Sbjct: 117 SGCKRVRYCSQGCQSKHWQSGHKFKCKQ 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,646,420
Number of Sequences: 37544
Number of extensions: 262556
Number of successful extensions: 850
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)