Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0572.Seq
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 56 2e-08
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 56 2e-08
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 54 7e-08
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 54 9e-08
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 53 2e-07
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 52 4e-07
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 49 2e-06
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 41 9e-04
SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_25540| Best HMM Match : Thyroglobulin_1 (HMM E-Value=2.8e-05) 29 2.9
SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39) 29 2.9
SB_37044| Best HMM Match : rve (HMM E-Value=4.1e-07) 29 3.8
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_50579| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19) 27 8.7
SB_46096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_34989| Best HMM Match : Tropomyosin (HMM E-Value=3.2) 27 8.7
SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/65 (36%), Positives = 44/65 (67%)
Frame = +1
Query: 403 LDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYALPEGCTAESVESRLS 582
LDV+ + PE++S K + ++ V +H V + +G+ ++F R +ALPEG A +V++R+S
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEASNVKTRIS 70
Query: 583 SYGVL 597
++G L
Sbjct: 71 NHGQL 75
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +1
Query: 355 DLGSSIKSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRY 534
D G DKF + +DV F P+ + V+ ++V+ H+V+ + + Y+A F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 535 ALPEGCTAESVESRLSSYGVL 597
LP +S+ +RL G L
Sbjct: 146 VLPREVDMDSLTTRLDKEGKL 166
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/65 (36%), Positives = 44/65 (67%)
Frame = +1
Query: 403 LDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYALPEGCTAESVESRLS 582
LDV+ + PE++S K + ++ V +H V + +G+ ++F R +ALPEG A +V++R+S
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEASNVKTRIS 70
Query: 583 SYGVL 597
++G L
Sbjct: 71 NHGQL 75
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +1
Query: 355 DLGSSIKSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRY 534
D G DKF + +DV F P+ + V+ ++V+ H+V+ + + Y+A F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 535 ALPEGCTAESVESRLSSYGVL 597
LP +S+ +RL G L
Sbjct: 146 VLPREVDMDSLTTRLDKEGKL 166
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/65 (35%), Positives = 43/65 (66%)
Frame = +1
Query: 403 LDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYALPEGCTAESVESRLS 582
LDV+ + PE++S K + ++ V +H V + +G+ ++F R + LPEG A +V++R+S
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEASNVKTRIS 70
Query: 583 SYGVL 597
++G L
Sbjct: 71 NHGQL 75
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/65 (35%), Positives = 43/65 (66%)
Frame = +1
Query: 403 LDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYALPEGCTAESVESRLS 582
LDV+ + PE++S K + ++ V +H V + +G+ ++F R + LPEG A +V++R+S
Sbjct: 246 LDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEASNVKTRIS 304
Query: 583 SYGVL 597
++G L
Sbjct: 305 NHGQL 309
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +1
Query: 355 DLGSSIKSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRY 534
D G DKF + +DV F P+ + V+ ++V+ H+V+ + + Y+A F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 535 ALPEGCTAESVESRLSSYGVL 597
LP +S+ +RL G L
Sbjct: 146 VLPREVDMDSLTTRLDKEGKL 166
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +1
Query: 355 DLGSSIKSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRY 534
D G DKF + +DV F P+ + V+ ++V+ H+V+ + + Y+A F R++
Sbjct: 321 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 379
Query: 535 ALPEGCTAESVESRLSSYGVL 597
LP +S+ +RL G L
Sbjct: 380 VLPREVDMDSLTTRLDKEGKL 400
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/65 (35%), Positives = 43/65 (66%)
Frame = +1
Query: 403 LDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYALPEGCTAESVESRLS 582
LDV+ + PE++S K + ++ V +H V + +G+ ++F R + LPEG A +V++R+S
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEASNVKTRIS 70
Query: 583 SYGVL 597
++G L
Sbjct: 71 NHGQL 75
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +1
Query: 355 DLGSSIKSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRY 534
D G DKF + +DV F P+ + V+ ++V+ H+V+ + + Y+A F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 535 ALPEGCTAESVESRLSSYGVL 597
LP +S+ +RL G L
Sbjct: 146 VLPREVDMDSLTTRLDKEGKL 166
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +1
Query: 403 LDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYALPEGCTAESVESRLS 582
LDV+ + PE++S K + + V +H V + ++G+ ++F R + LPEG E+V SR+S
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGIDPENVTSRIS 70
Query: 583 SYGVL 597
++G L
Sbjct: 71 NHGHL 75
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = +1
Query: 373 KSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYALPEGC 552
K+ DKF + +DV F PE + V+ ++V H+V+ + + Y+A F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREV 150
Query: 553 TAESVESRLSSYGVL 597
+S+ +RL G L
Sbjct: 151 DMDSLTTRLDKEGKL 165
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/65 (35%), Positives = 42/65 (64%)
Frame = +1
Query: 403 LDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYALPEGCTAESVESRLS 582
LDV+ + PE++S K + + V +H V + +G+ ++F R + LPEG A +V++R+S
Sbjct: 13 LDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEASNVKTRIS 71
Query: 583 SYGVL 597
++G L
Sbjct: 72 NHGQL 76
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +1
Query: 361 GSSIKSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYAL 540
G+ +S DKF + +DV+ F PE + V+ ++V+ H+V+ + + Y+A F R++ L
Sbjct: 89 GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFIL 147
Query: 541 PEGCTAESVESRLSSYGVL 597
P +S+ +RL G L
Sbjct: 148 PREVDMDSLTTRLDKEGKL 166
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 358 LGSSIKSDRDKFHV-NLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRY 534
L ++ + + DK + LDV+++ PE++S+K I + KH + ++GY +F R Y
Sbjct: 29 LAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHK-SEGEHGYETSEFHRSY 87
Query: 535 ALPEGCTAESVESRLSSYGVL 597
LP+G +V SR++ G+L
Sbjct: 88 NLPDGVDVSTVSSRITGDGLL 108
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = +1
Query: 379 DRDKFHV-NLDVQHFAPEDLSVKTADVYIVVA--RKHDVKKDQYGYNARQFTRRYALPEG 549
D DKF + LDV+ F PE+++ K + I V+ ++H+ + G+++++F R Y LPEG
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHE---SEEGFDSKEFRRCYNLPEG 58
Query: 550 CTAESVESRLSSYGVL 597
S+ +R++ G+L
Sbjct: 59 VDESSISTRIAEDGML 74
Score = 44.0 bits (99), Expect = 9e-05
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +1
Query: 379 DRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYALPEGCTA 558
D KF + LDV F PE++ VK + V + + ++ + + ARQF R + LP
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQECEEHGF-FTARQFNRHFVLPREVDM 154
Query: 559 ESVESRLSSYGVL 597
+++ RL GVL
Sbjct: 155 DTLVPRLGKDGVL 167
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 346 AARDLGSSIKSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFT 525
A ++ S+ D KF + LDV F PE++ VK + V + + ++ + + ARQF
Sbjct: 13 ATKENQSAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQECEEHGF-FTARQFN 71
Query: 526 RRYALPE 546
R + LP+
Sbjct: 72 RHFVLPQ 78
>SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 370 IKSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKH 480
I D D+FH+ D H ++L ++T ++YI H
Sbjct: 45 IHLDTDEFHIETDELHIDIDELHIETYELYIDTDELH 81
>SB_25540| Best HMM Match : Thyroglobulin_1 (HMM E-Value=2.8e-05)
Length = 162
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 438 C*NGGRLHRGCSQTRCEERS 497
C NGG + GC +T C++R+
Sbjct: 42 CPNGGNAYNGCQETDCQKRA 61
>SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39)
Length = 504
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 438 C*NGGRLHRGCSQTRCEERS 497
C NGG + GC +T C++R+
Sbjct: 442 CPNGGNAYNGCQETDCQKRA 461
>SB_37044| Best HMM Match : rve (HMM E-Value=4.1e-07)
Length = 1033
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 385 DKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQF 522
DK V+ FA T +V+ + + HD K+D Y Y R++
Sbjct: 164 DKVRVSKAKNVFAKGYTPNWTEEVFTIAQQYHDRKQDTYAYRVREY 209
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 337 LAAAARDLGSSIKSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQY 501
+ A A DL + ++ + D+ ++Q FA + +++ADVYI+V +HD+ Y
Sbjct: 204 IRAVAGDLTAVMERNVDELSGG-ELQRFACAVVCIQSADVYIIVV-EHDLSVLDY 256
>SB_50579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 318 LPPVASPCCRGSRPWLQHQK 377
L P SPCC+ + W+Q+ K
Sbjct: 296 LKPTMSPCCKTTTTWVQNLK 315
>SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19)
Length = 494
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 513 RIVTILIFLHIVFASNHDVDVRRF-NREIFRGEMLDVQVYVELIPITFDAGAKVSSRGSK 337
R + + ++ HIV + H +DV + + ++V +Y ++ F A RGS
Sbjct: 391 RYIEVPVYCHIVISMFHCIDVSLYRGSTVLPYRYIEVPLYCHIVISRFHCIAVSLYRGSI 450
Query: 336 VTP 328
V P
Sbjct: 451 VLP 453
>SB_46096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 433 LSVKTADVYIVVARKHDVKKDQYGYNARQFTRRYALPEGCTAE 561
+SV T Y+ VA KH + Y Y+ R+F + + EG A+
Sbjct: 17 ISVLTCPRYVRVATKHVSSSNAYEYDVRRFAIAFFM-EGPAAQ 58
>SB_34989| Best HMM Match : Tropomyosin (HMM E-Value=3.2)
Length = 314
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = +1
Query: 352 RDLGSSIKSDRDKFH----VNLDVQHFAPE---DLSVKTADVYIVVARKHDVKKDQYGYN 510
+++ S K +DK + VN D + +P D+ ++T DV +++H+ D YG N
Sbjct: 65 QNVRESRKPSKDKIYNKTLVNEDGEISSPNEDMDIDLQTTDVRNDSSKRHEGADDSYGKN 124
Query: 511 ARQFTRR 531
TRR
Sbjct: 125 KGIRTRR 131
>SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2937
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 429 RSLC*NGGRLHRGCSQTRCEERSVWLQCASIHS 527
R++C + G+L G +R + S++ C S HS
Sbjct: 892 RAMCRSFGKLPTGMDDSRVIDNSIYSTCKSYHS 924
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,844,334
Number of Sequences: 59808
Number of extensions: 337926
Number of successful extensions: 934
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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