Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0572.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    87   3e-19
DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    24   4.3  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   5.7  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 87.4 bits (207), Expect = 3e-19
 Identities = 39/81 (48%), Positives = 55/81 (67%)
 Frame = +1

Query: 355 DLGSSIKSDRDKFHVNLDVQHFAPEDLSVKTADVYIVVARKHDVKKDQYGYNARQFTRRY 534
           D GS++   +DKF +NLDVQ F+PE++SVK  D  ++V  KH+ K+D +GY +R F RRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 535 ALPEGCTAESVESRLSSYGVL 597
            LP+G     + S LSS G+L
Sbjct: 63  MLPKGHNEADIVSSLSSDGIL 83


>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 477 TRCEERSVWLQCAS 518
           T+C E+ VW  CAS
Sbjct: 25  TKCGEKEVWDDCAS 38


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 447 GGRLHRGCSQTRCEERSVWLQCASIHSSLRF 539
           GGRLH   S   C   S   + A I   LR+
Sbjct: 425 GGRLHETVSSHTCLSSSAEYELALILKELRY 455


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,847
Number of Sequences: 2352
Number of extensions: 10143
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)