Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0571.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   128   4e-32
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   111   4e-27
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   111   4e-27
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    25   0.59 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   5.5  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  128 bits (309), Expect = 4e-32
 Identities = 60/75 (80%), Positives = 67/75 (89%)
 Frame = +1

Query: 256 FSETLTRAKFEELNMDLFRSTLKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 435
           FSETLTRAKFEELN D F  TLKPV+KVLEDADM K  +DEIVLVGGSTRIPK+QQL+K+
Sbjct: 120 FSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIPKIQQLIKD 179

Query: 436 FFNGKEPSRGINPDE 480
           FF+GKE +RGINPDE
Sbjct: 180 FFDGKELNRGINPDE 194



 Score =  103 bits (248), Expect = 1e-24
 Identities = 50/79 (63%), Positives = 60/79 (75%)
 Frame = +2

Query: 2   SLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIXXXXXXXXXXXXXDNRAVQKLRREV 181
           S+LTIDNGVFEVVAT+GDTHLGGEDFDQ+VM++FI             D +A+QKLRREV
Sbjct: 35  SILTIDNGVFEVVATSGDTHLGGEDFDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREV 94

Query: 182 EKAKRALSSSHQVKIEIES 238
           EKAKR LSS H+  + IE+
Sbjct: 95  EKAKRDLSSVHKTTLTIEN 113


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  111 bits (268), Expect = 4e-27
 Identities = 50/75 (66%), Positives = 61/75 (81%)
 Frame = +1

Query: 256 FSETLTRAKFEELNMDLFRSTLKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 435
           +S T+TRA+FE++NMD F+  + PV KVL+DA + K  V EIVLVGGSTRIPKVQQL+ E
Sbjct: 121 YSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITE 180

Query: 436 FFNGKEPSRGINPDE 480
           +FNGKEP R INPDE
Sbjct: 181 YFNGKEPCRSINPDE 195



 Score = 86.6 bits (205), Expect = 2e-19
 Identities = 42/83 (50%), Positives = 56/83 (67%)
 Frame = +2

Query: 2   SLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIXXXXXXXXXXXXXDNRAVQKLRREV 181
           SLLTI+ G+FEV AT GDTHLGGEDFD R++E+               + RA+++LR + 
Sbjct: 36  SLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQC 95

Query: 182 EKAKRALSSSHQVKIEIESFFEG 250
           E+AKR LSS+ Q  IEI+S F+G
Sbjct: 96  ERAKRTLSSATQASIEIDSLFDG 118


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  111 bits (268), Expect = 4e-27
 Identities = 50/75 (66%), Positives = 61/75 (81%)
 Frame = +1

Query: 256 FSETLTRAKFEELNMDLFRSTLKPVQKVLEDADMNKKDVDEIVLVGGSTRIPKVQQLVKE 435
           +S T+TRA+FE++NMD F+  + PV KVL+DA + K  V EIVLVGGSTRIPKVQQL+ E
Sbjct: 121 YSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITE 180

Query: 436 FFNGKEPSRGINPDE 480
           +FNGKEP R INPDE
Sbjct: 181 YFNGKEPCRSINPDE 195



 Score = 86.6 bits (205), Expect = 2e-19
 Identities = 42/83 (50%), Positives = 56/83 (67%)
 Frame = +2

Query: 2   SLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIXXXXXXXXXXXXXDNRAVQKLRREV 181
           SLLTI+ G+FEV AT GDTHLGGEDFD R++E+               + RA+++LR + 
Sbjct: 36  SLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQC 95

Query: 182 EKAKRALSSSHQVKIEIESFFEG 250
           E+AKR LSS+ Q  IEI+S F+G
Sbjct: 96  ERAKRTLSSATQASIEIDSLFDG 118


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -2

Query: 538 SVSCSPLSTPPAQQHHMRQPHQG*FHEMAPC 446
           S+ C P          +R   +G FHE  PC
Sbjct: 60  SICCGPFGCLVGTPETLRCQREGFFHEREPC 90


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 614 NEFGHHSTDSFNTHGQRVDI 555
           +E G+H+ +S +  G+ VDI
Sbjct: 41  DEEGYHTPESLHYEGRAVDI 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,187
Number of Sequences: 336
Number of extensions: 3089
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)