Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0571.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   1.7  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   4.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.0  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 502 QQHHMRQPHQG*FHEMAPCH*RIP 431
           +  H  QP Q  FH  +P H R P
Sbjct: 219 RHQHQLQPQQRRFHRQSPAHRRKP 242


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 164  KLRREVEKAKRALSSSHQVKIEIESFFEGDASLKHS 271
            K RREV+   + L++ HQ    IES  E   S + +
Sbjct: 903  KARREVQALAKELAAIHQSIANIESRIESMKSKRQT 938


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 149  NRAVQKLRREVEKAKRALS 205
            NRA + + R ++KAKR L+
Sbjct: 1005 NRATEGIGRSIQKAKRRLN 1023


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,953
Number of Sequences: 2352
Number of extensions: 13092
Number of successful extensions: 51
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)