Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0570.Seq
         (517 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    25   0.40 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.6  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   1.6  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   1.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.6  

>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 472 SGSCTLDSADPSSNEHCLG 416
           S S  L+S DP+S   CLG
Sbjct: 223 SSSSALESPDPASRSSCLG 241


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 472 SGSCTLDSADPSSNEHCLG 416
           S S  L+S +P+S   CLG
Sbjct: 223 SSSSALESPNPASRSSCLG 241


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 472 SGSCTLDSADPSSNEHCLG 416
           S S  L+S +P+S   CLG
Sbjct: 12  SSSSALESPNPASRSSCLG 30


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 472 SGSCTLDSADPSSNEHCLG 416
           S S  L+S +P+S   CLG
Sbjct: 12  SSSSALESPNPASRSSCLG 30


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 200 CSGDL*RPSCWREASLLT 253
           C  +  +P+CWRE    T
Sbjct: 876 CKCENGKPTCWRECDKAT 893


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 32  MVSILEQYYSAVTDPCNYKG 91
           +V++    Y A+T P N+ G
Sbjct: 137 LVALSIDRYDAITHPMNFSG 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,369
Number of Sequences: 336
Number of extensions: 2080
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)