Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0570.Seq
         (517 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81539-1|CAB04389.1|  228|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z78539-2|CAB01729.2|  410|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF100656-9|AAF99966.1|  215|Caenorhabditis elegans Hypothetical ...    27   6.0  
Z97628-3|CAB10727.1|  819|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z79755-13|CAB02114.1|  819|Caenorhabditis elegans Hypothetical p...    27   8.0  

>Z81539-1|CAB04389.1|  228|Caenorhabditis elegans Hypothetical
           protein F46A8.3 protein.
          Length = 228

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
 Frame = +3

Query: 213 YDGPRAGGRLRCLRKTSPEV-----RDWLTINAPW 302
           Y G R GGR R  R   P        DW+TIN P+
Sbjct: 65  YSGRRGGGRQRPPRPPRPAPTPKPREDWITINGPF 99


>Z78539-2|CAB01729.2|  410|Caenorhabditis elegans Hypothetical
           protein C31E10.3 protein.
          Length = 410

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/60 (21%), Positives = 26/60 (43%)
 Frame = +3

Query: 279 WLTINAPWFDDVIAVAYQENMTYKEFILQCTEDAKKYLNSYVRDDKPKQCSFEEGSALSN 458
           W T+N         +  +E   +     +  ++  KY N  +R+D  K C +++ S L +
Sbjct: 276 WFTLNFENLHPDFCLTMEEMQRFTTVNAKFVKNEAKYCNITIREDGQKTCVWDKMSTLDS 335


>AF100656-9|AAF99966.1|  215|Caenorhabditis elegans Hypothetical
           protein F49F1.10 protein.
          Length = 215

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 8/38 (21%)
 Frame = +3

Query: 213 YDGPRAGGRLRCLRK-------TSPEVRD-WLTINAPW 302
           Y G R GGR R  R        T+P+ RD W+TIN P+
Sbjct: 40  YSGRRGGGRHRPPRPPRPSKPVTTPKPRDDWITINGPF 77


>Z97628-3|CAB10727.1|  819|Caenorhabditis elegans Hypothetical
           protein F43G9.12 protein.
          Length = 819

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 327 YQENMTYKEFILQCTEDAKKYLNSYVRDDKPKQCSFEEGSALS 455
           YQE   Y   +L+C  +    +NS +  DK + C     S LS
Sbjct: 393 YQELRVYSRSLLECLNEKVGEINSII--DKKRDCGKSRTSRLS 433


>Z79755-13|CAB02114.1|  819|Caenorhabditis elegans Hypothetical
           protein F43G9.12 protein.
          Length = 819

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 327 YQENMTYKEFILQCTEDAKKYLNSYVRDDKPKQCSFEEGSALS 455
           YQE   Y   +L+C  +    +NS +  DK + C     S LS
Sbjct: 393 YQELRVYSRSLLECLNEKVGEINSII--DKKRDCGKSRTSRLS 433


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,050,731
Number of Sequences: 27780
Number of extensions: 204921
Number of successful extensions: 601
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)