Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0567.Seq
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73102-15|CAA97416.1|  401|Caenorhabditis elegans Hypothetical p...    42   4e-04
AL132948-23|CAC51049.1|  429|Caenorhabditis elegans Hypothetical...    27   8.7  

>Z73102-15|CAA97416.1|  401|Caenorhabditis elegans Hypothetical
           protein B0035.14 protein.
          Length = 401

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 14/36 (38%), Positives = 28/36 (77%)
 Frame = +1

Query: 4   NLKVPYYVKENFHSDYQGSLRRLEMSIEEEYLVALR 111
           +L+VPY+V+ +F + Y+G +R++E  +E++Y+  LR
Sbjct: 320 DLRVPYFVRTDFETSYRGRIRQVEQQVEDDYIQNLR 355


>AL132948-23|CAC51049.1|  429|Caenorhabditis elegans Hypothetical
           protein Y39B6A.31 protein.
          Length = 429

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 597 KWLLKPIDIYNVNAPPTLRLSSKVSSAQEIFT 502
           K LLK +D+ +V  PP ++  SK+ S  ++ T
Sbjct: 261 KGLLKSVDLLSVLKPPVIQTMSKMRSQLKVCT 292


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,316,236
Number of Sequences: 27780
Number of extensions: 228541
Number of successful extensions: 478
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)