Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0563.Seq
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 79 4e-15
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 79 4e-15
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 72 4e-13
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 62 4e-10
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 60 1e-09
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 60 1e-09
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 58 6e-09
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 58 6e-09
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 54 8e-08
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 49 4e-06
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 48 7e-06
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 44 8e-05
At3g20560.1 68416.m02603 thioredoxin family protein contains Pfa... 44 1e-04
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 41 0.001
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 41 0.001
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 41 0.001
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 41 0.001
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 39 0.003
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 37 0.016
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 36 0.029
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 35 0.050
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 35 0.066
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 34 0.087
At3g19780.1 68416.m02504 expressed protein 33 0.15
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 33 0.15
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 33 0.27
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 33 0.27
At3g22360.1 68416.m02823 alternative oxidase 1b, mitochondrial (... 32 0.46
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 31 1.1
At3g27620.1 68416.m03450 alternative oxidase 1c, mitochondrial (... 31 1.1
At5g37950.1 68418.m04571 hypothetical protein 30 1.4
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 30 1.4
At1g08430.1 68414.m00932 expressed protein contains Pfam profile... 30 1.9
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 29 2.5
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 29 2.5
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 29 2.5
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 29 3.3
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 29 3.3
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 29 4.3
At3g03860.1 68416.m00398 expressed protein 29 4.3
At5g38010.1 68418.m04578 UDP-glucoronosyl/UDP-glucosyl transfera... 28 5.7
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 28 5.7
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 28 5.7
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 28 5.7
At1g69850.1 68414.m08039 nitrate transporter (NTL1) identical to... 28 5.7
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 28 5.7
At1g08440.1 68414.m00933 hypothetical protein contains Pfam prof... 28 5.7
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 27 10.0
At3g43270.1 68416.m04567 pectinesterase family protein contains ... 27 10.0
At1g61970.1 68414.m06990 mitochondrial transcription termination... 27 10.0
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 27 10.0
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 VKTDVPPVALAKVDCTEG-GKSTCEQFSVSGYPTLKIFRKG-ELSSEYNGPRESNGIVKY 427
+ ++VPPV LAK+D +E + Q+ V G+PT+KIFR G + EYNGPRE+ GIV Y
Sbjct: 76 LSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTY 135
Query: 428 MRAQVGPSSKELLTVADFEAFTSKDEV 508
++ Q GP+S E+ + D S +V
Sbjct: 136 LKKQSGPASAEIKSADDASEVVSDKKV 162
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
+E VL L ++F+ +++HD +V FYAPWCGHCK+L PEY AA
Sbjct: 29 KEFVLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAA 73
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 132 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 230
++DS VL+ L+ FYAPWCGHC++L P
Sbjct: 380 VSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAP 412
Score = 35.1 bits (77), Expect = 0.050
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +1
Query: 508 MVVGFFEKESDLKGE-FLKTADKLREEVTFAHSSANEVLEK--TGYKNNVV-LYRPKRLQ 675
+VVG F K S + + F+ A+KLR E+ FAH+S ++L + + VV L++P
Sbjct: 163 VVVGIFPKLSGSEFDSFMAIAEKLRSELDFAHTSDAKLLPRGESSVTGPVVRLFKP--FD 220
Query: 676 NKFEDSSVAFDGDTEKVSLKAFIK 747
+F DS FDG+ +L+ F+K
Sbjct: 221 EQFVDSK-DFDGE----ALEKFVK 239
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 VKTDVPPVALAKVDCTEG-GKSTCEQFSVSGYPTLKIFRKG-ELSSEYNGPRESNGIVKY 427
+ ++VPPV LAK+D +E + Q+ V G+PT+KIFR G + EYNGPRE+ GIV Y
Sbjct: 76 LSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTY 135
Query: 428 MRAQVGPSSKELLTVADFEAFTSKDEV 508
++ Q GP+S E+ + D S +V
Sbjct: 136 LKKQSGPASAEIKSADDASEVVSDKKV 162
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
+E VL L ++F+ +++HD +V FYAPWCGHCK+L PEY AA
Sbjct: 29 KEFVLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAA 73
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 132 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 230
++DS VL+ L+ FYAPWCGHC++L P
Sbjct: 380 VSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAP 412
Score = 35.1 bits (77), Expect = 0.050
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +1
Query: 508 MVVGFFEKESDLKGE-FLKTADKLREEVTFAHSSANEVLEK--TGYKNNVV-LYRPKRLQ 675
+VVG F K S + + F+ A+KLR E+ FAH+S ++L + + VV L++P
Sbjct: 163 VVVGIFPKLSGSEFDSFMAIAEKLRSELDFAHTSDAKLLPRGESSVTGPVVRLFKP--FD 220
Query: 676 NKFEDSSVAFDGDTEKVSLKAFIK 747
+F DS FDG+ +L+ F+K
Sbjct: 221 EQFVDSK-DFDGE----ALEKFVK 239
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 72.1 bits (169), Expect = 4e-13
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = +2
Query: 269 PPVALAKVDCTE-GGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQV 442
PP+ALAK+D +E K ++ + G+PTLKI R G S +YNGPRE+ GIV Y++ Q
Sbjct: 80 PPLALAKIDASEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNGPREAEGIVTYLKKQS 139
Query: 443 GPSSKEL 463
GP+S E+
Sbjct: 140 GPASVEI 146
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +3
Query: 48 FKMFGSLKFVLLLGIIYLCKAAEED---VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 218
FK F +LLL + +EE VL L S+F+ +S+HD +V FYAPWCGHC+
Sbjct: 3 FKGFACFSILLLLSLFVSSIRSEETKEFVLTLDHSNFTETISKHDFIVVEFYAPWCGHCQ 62
Query: 219 RLKPEYAVAA 248
+L PEY AA
Sbjct: 63 KLAPEYEKAA 72
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 156 VLSQHDTALVMFYAPWCGHCKRLKP 230
V L+ FYAPWCGHC++L P
Sbjct: 386 VFKSGKNVLIEFYAPWCGHCQKLAP 410
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/42 (61%), Positives = 30/42 (71%)
Frame = +3
Query: 123 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
VL+LTDS+F + +S D V FYAPWCGHCKRL PE AA
Sbjct: 34 VLELTDSNFDSAISTFDCIFVDFYAPWCGHCKRLNPELDAAA 75
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/59 (27%), Positives = 35/59 (59%)
Frame = +2
Query: 272 PVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGP 448
P+ +AK++ + + + + +PTL ++ G + EY GPR+++ +V+Y++ V P
Sbjct: 84 PIVIAKLNADKYSR-LARKIEIDAFPTLMLYNHG-VPMEYYGPRKADLLVRYLKKFVAP 140
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/55 (49%), Positives = 33/55 (60%)
Frame = +3
Query: 72 FVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 236
F L + L A +DV+ LTD F + + ALV FYAPWCGHCK+L PEY
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEY 62
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVGPS 451
V +AKVDC E KS C ++ VSGYPT++ F KG L +Y GPR + + +Y+ + G +
Sbjct: 75 VLIAKVDCDEQ-KSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEGGTN 133
Query: 452 SK 457
K
Sbjct: 134 VK 135
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 AAEEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
A ++V+ LT +F VL Q+ LV FYAPWCGHCK L P Y A
Sbjct: 138 AVPQNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVA 185
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK-GELSSEYNGPRESNGIVKYMRAQVGPS 451
V +A +D + K+ E++ VSG+PTLK F K + +Y+G R+ + V ++ + G S
Sbjct: 194 VVIANLDA-DAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFINEKSGTS 252
Query: 452 --SKELLT 469
SK LT
Sbjct: 253 RDSKGQLT 260
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/55 (49%), Positives = 33/55 (60%)
Frame = +3
Query: 72 FVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 236
F L + L A +DV+ LTD F + + ALV FYAPWCGHCK+L PEY
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEY 62
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVGPS 451
V +AKVDC E KS C ++ VSGYPT++ F KG L +Y GPR + + +Y+ + G +
Sbjct: 75 VLIAKVDCDEQ-KSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEGGTN 133
Query: 452 SK 457
K
Sbjct: 134 VK 135
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 AAEEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
A ++V+ LT +F VL Q+ LV FYAPWCGHCK L P Y A
Sbjct: 138 AVPQNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVA 185
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK-GELSSEYNGPRESNGIVKYMRAQVGPS 451
V +A +D + K+ E++ VSG+PTLK F K + +Y+G R+ + V ++ + G S
Sbjct: 194 VVIANLDA-DAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFINEKSGTS 252
Query: 452 --SKELLT 469
SK LT
Sbjct: 253 RDSKGQLT 260
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 58.0 bits (134), Expect = 6e-09
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
E+DV+ + + +F+ V+ + LV FYAPWCGHC+ L PEYA AA
Sbjct: 102 EKDVVVIKERNFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAA 146
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 454
V LAK+D TE + +++ V G+PTL F GE Y G R IV +++ ++GP
Sbjct: 154 VVLAKIDATEENE-LAQEYRVQGFPTLLFFVDGE-HKPYTGGRTKETIVTWVKKKIGPGV 211
Query: 455 KELLTVADFE-AFTSKDEVWL 514
L T+ D E TS ++V L
Sbjct: 212 YNLTTLDDAEKVLTSGNKVVL 232
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 114 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEY 236
+EDV + +F VL L+ YAPWCGHC+ L+P Y
Sbjct: 440 DEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMY 481
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 58.0 bits (134), Expect = 6e-09
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
E+DV+ + + +F+ V+ + LV FYAPWCGHC+ L PEYA AA
Sbjct: 102 EKDVVVIKERNFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAA 146
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 454
V LAK+D TE + +++ V G+PTL F GE Y G R IV +++ ++GP
Sbjct: 154 VVLAKIDATEENE-LAQEYRVQGFPTLLFFVDGE-HKPYTGGRTKETIVTWVKKKIGPGV 211
Query: 455 KELLTVADFE-AFTSKDEVWL 514
L T+ D E TS ++V L
Sbjct: 212 YNLTTLDDAEKVLTSGNKVVL 232
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 114 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEY 236
+EDV + +F VL L+ YAPWCGHC+ L+P Y
Sbjct: 440 DEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMY 481
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
E+DV LT +F+ + + A+V FYAPWCG C+ L PEYA AA
Sbjct: 98 EKDVAVLTKDNFTEFVGNNSFAMVEFYAPWCGACQALTPEYAAAA 142
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/75 (33%), Positives = 42/75 (56%)
Frame = +2
Query: 278 ALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSK 457
ALAK+D TE G +++ + G+PT+ +F GE+ Y G R +GIV +++ + PS
Sbjct: 150 ALAKIDATEEG-DLAQKYEIQGFPTVFLFVDGEMRKTYEGERTKDGIVTWLKKKASPSIH 208
Query: 458 ELLTVADFEAFTSKD 502
+ T + E S +
Sbjct: 209 NITTKEEAERVLSAE 223
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 120 DVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEY 236
DV + ++F VL + L+ YAPWCGHC+ +P Y
Sbjct: 438 DVKVIVGNNFDEIVLDESKDVLLEIYAPWCGHCQSFEPIY 477
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 VLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGL 254
V+ LT S+F S VL+ + LV F+APWCGHCK L P + A +
Sbjct: 32 VVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVANI 76
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 LDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
++L S+F V+ ++ +V F+APWCGHCK+L PE+ AA
Sbjct: 165 VELNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAA 206
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +2
Query: 281 LAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQV 442
+A +D + +S + + + G+PT+K+F G+ +Y G R++ I + Q+
Sbjct: 83 VAAIDA-DAHQSAAQDYGIKGFPTIKVFVPGKAPIDYQGARDAKSIANFAYKQI 135
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 123 VLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
VL LT S+F S VL+ + LV F+APWCGHC+ L P + A
Sbjct: 30 VLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVA 72
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 LDLTDSDFSAVLSQH-DTALVMFYAPWCGHCKRLKPEYAVAA 248
++L S+F ++++ + +V F+APWCGHCK+L PE+ AA
Sbjct: 166 VELNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAA 207
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +2
Query: 281 LAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKE 460
+A +D + KS + + V G+PT+K+F G+ +Y G R++ I ++ Q+ K+
Sbjct: 81 VAAIDA-DAHKSVSQDYGVRGFPTIKVFVPGKPPIDYQGARDAKSISQFAIKQIKALLKD 139
Query: 461 LL 466
L
Sbjct: 140 RL 141
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKG-ELSSE--------YNGPRESNGIVKY 427
V LAKVDCT+ G C + + GYP+++IFRKG +L + Y G R++ +VK
Sbjct: 199 VILAKVDCTQEG-DLCRRNHIQGYPSIRIFRKGSDLKDDNAHHDHESYYGDRDTESLVKM 257
Query: 428 MRAQVGP 448
+ + V P
Sbjct: 258 VVSLVEP 264
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 117 EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
ED + LT +F Q +V FYAPWC C LKP + AA
Sbjct: 141 EDSVPLTGRNFDTFTHQFPILVVNFYAPWCYWCNLLKPSWEKAA 184
>At3g20560.1 68416.m02603 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 483
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSE---------YNGPRESNGIVKY 427
V L VDCTE + C++ + GYP+++IFRKG E Y G R+++ IVK
Sbjct: 199 VLLGNVDCTEE-PALCKRNHIQGYPSIRIFRKGSDLREDHGHHEHESYYGDRDTDSIVKM 257
Query: 428 MRAQVGPSSKELLTVA 475
+ V P E VA
Sbjct: 258 VEGLVAPIHPETHKVA 273
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 117 EDVLDLTDSDFSAVLSQHDTALVM-FYAPWCGHCKRLKPEYAVAAGL 254
+ + LT + F A LS H LV+ F APWC RLKP + AA +
Sbjct: 141 DGAIPLTSASFEA-LSHHFPILVVNFNAPWCYWSNRLKPSWEKAANI 186
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSE---------YNGPRESNGIVKY 427
V L VDCTE + C+ + GYP+++IFR+G E Y G R+++ +VK
Sbjct: 200 VLLGSVDCTEE-PTLCKSNHIQGYPSIRIFRRGSGLREDHGNHEHESYYGDRDTDSLVKM 258
Query: 428 MRAQVGPSSKE 460
+ + P KE
Sbjct: 259 VEELLKPIKKE 269
Score = 34.3 bits (75), Expect = 0.087
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 126 LDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGL*R 260
+ LT + F +V FYAPWC RLKP + A+ + R
Sbjct: 145 IPLTGAAFEKFTHHFQILVVNFYAPWCYWSNRLKPSWVKASQITR 189
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 75 VLLLGI-IYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 224
+LLL I I L KA +V+ LT FS + + DTA V F PWC HCK+L
Sbjct: 13 ILLLFIPIELVKA---EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
Score = 35.1 bits (77), Expect = 0.050
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 430
+ + +VDC ++ C + + YPT +F GE S+Y G R+ + ++
Sbjct: 78 IEVGEVDCGTS-RAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFV 128
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 75 VLLLGI-IYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 224
+LLL I I L KA +V+ LT FS + + DTA V F PWC HCK+L
Sbjct: 13 ILLLFIPIELVKA---EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
Score = 35.1 bits (77), Expect = 0.050
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 430
+ + +VDC ++ C + + YPT +F GE S+Y G R+ + ++
Sbjct: 78 IEVGEVDCGTS-RAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFV 128
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 75 VLLLGI-IYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 224
+LLL I I L KA +V+ LT FS + + DTA V F PWC HCK+L
Sbjct: 13 ILLLFIPIELVKA---EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
Score = 35.1 bits (77), Expect = 0.050
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 275 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 430
+ + +VDC ++ C + + YPT +F GE S+Y G R+ + ++
Sbjct: 78 IEVGEVDCGTS-RAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFV 128
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 AAEEDVLDLTDSDFSAVLSQHDT-ALVMFYAPWCGHCKRLKP 230
AA +V +L+DS++ + + D LV F+APWCG C+ + P
Sbjct: 83 AAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHP 124
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 99 LCKAAEE--DVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKP 230
+C+A E D+ + DS + S VL +V F+APWCG CK + P
Sbjct: 72 VCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDP 118
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 111 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
A+ VL+L V+ ++ +V+ YAPWC L P +A AA
Sbjct: 75 AQRIVLELNGDYTKRVIDGNEFVMVLGYAPWCARSAELMPRFAEAA 120
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 35.1 bits (77), Expect = 0.050
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 111 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 248
A+ V++L + ++ ++ +V+ YAPWC L P +A AA
Sbjct: 73 AQRIVVELNGDNTKRLIDGNEYVMVLGYAPWCARSAELMPRFAEAA 118
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 34.7 bits (76), Expect = 0.066
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 87 GIIYLCKAAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKP 230
G+I + + + DS + S VL + V F+APWCG CK + P
Sbjct: 64 GVICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDP 112
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 34.3 bits (75), Expect = 0.087
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDT--ALVMFYAPWCGHCKRLKPEYAVAAGL 254
++ ++L ++F +VL A+V F+A WC C+ KP Y A L
Sbjct: 34 KDKAVELNTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYKPHYEKVARL 82
>At3g19780.1 68416.m02504 expressed protein
Length = 1014
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 66 LKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 233
L F++ + II L + + LT+ +FS+ + H L+ PWCG + LK E
Sbjct: 9 LPFLVFVSII-LPSSCHGEWEILTEQNFSSQIRLHPHVLLFVTTPWCGESRSLKYE 63
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 123 VLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKP 230
+ ++ +S+FS+ VL LV F A WCG CK + P
Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYP 107
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDT--ALVMFYAPWCGHCKRLKPEYAVAAGL 254
+++ ++L ++F +V A++ F+A WC C+ KP Y A L
Sbjct: 40 KDNAIELNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARL 88
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 114 EEDVLDLTDSDFSAVLSQHDT--ALVMFYAPWCGHCKRLKPEYAVAAGL 254
+++ ++L ++F +V A++ F+A WC C+ KP Y A L
Sbjct: 40 KDNAIELNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARL 88
>At3g22360.1 68416.m02823 alternative oxidase 1b, mitochondrial
(AOX1B) identical to GB:O23913 [SP|O23913] from
[Arabidopsis thaliana]
Length = 325
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +2
Query: 605 QPMKFLKKPDTKTMWSCIVP-----SDSRTSLKTHLLPST 709
+PMK K+ T+ WSC P SD LK H +PST
Sbjct: 82 KPMKITKEDGTEWKWSCFRPWETYKSDLTIDLKKHHVPST 121
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 129 DLTDS--DFSAVLSQHDTALVMFYAPWCGHCKRLKPE 233
DLT S + LS +V FYA WC C+ L P+
Sbjct: 123 DLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPD 159
>At3g27620.1 68416.m03450 alternative oxidase 1c, mitochondrial
(AOX1C) identical to alternative oxidase 1c precursor
GB:O22048 [SP|O22048] from [Arabidopsis thaliana]
Length = 329
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +2
Query: 605 QPMKFLKKPDTKTMWSCIVP-----SDSRTSLKTHLLPST 709
+PMK K+ T+ WSC P +D LK H +PST
Sbjct: 86 KPMKITKEDGTEWKWSCFRPWETYKADLTIDLKKHHVPST 125
>At5g37950.1 68418.m04571 hypothetical protein
Length = 351
Score = 30.3 bits (65), Expect = 1.4
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = -2
Query: 567 SCFQELSFQVRFLFEESDNHTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGPLY 388
S F + V + T+S + + S SSLE W + L +P+ +GPLY
Sbjct: 160 SAFAPVEASVEVFKSSCEKGTASSMIINTVSCLEISSLE----WLQQELKIPIYPIGPLY 215
Query: 387 SEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLASATGG-TSVFTGRXLPHTLALVSYN 211
S+P ++ + E+C L S + + G T + T L LVS N
Sbjct: 216 MVSSAPPTSLLD----ENESCIDWLNKQKPSSVIYISLGSFTLLETKEVLEMASGLVSSN 271
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 135 TDSDFSAVLSQHDT-ALVMFYAPWCGHCKRLKP 230
T + F +L D LV FYA WCG C+ + P
Sbjct: 64 TFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVP 96
>At1g08430.1 68414.m00932 expressed protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 493
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 18 VRFC*KAPAKFKMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALV--MF 191
VRF KF +G L F+L +I L +E+++DL +S S V+ + ++ +F
Sbjct: 124 VRFFPWVKTKFD-YGILIFILTFALISLSGFRDEEIMDLAESRLSTVVIGGVSCILISIF 182
Query: 192 YAP-WCG 209
P W G
Sbjct: 183 VCPVWAG 189
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +3
Query: 105 KAAEEDVLDLTDSDF--SAVLSQHDTALVM-FYAPWCGHCKRLKPE 233
K+ ++L++ ++ ++L+ D +V+ FY+P CG CK L P+
Sbjct: 81 KSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPK 126
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 105 KAAEEDVLDLTDSD--FSAVLSQHDTALVM-FYAPWCGHCKRLKPEYAVAA 248
+ A +++D+T ++ +A+ D +++ FY WCG C+ + P+ A
Sbjct: 89 RKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTA 139
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +3
Query: 39 PAKFKMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 218
P + G LKF L E DS +++ LV +YA WCG C+
Sbjct: 38 PVRRVRTGDLKFPSLSSTTRCTPRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQ 97
Query: 219 RLKP 230
+ P
Sbjct: 98 FMVP 101
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 141 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 233
S +A+ + ++ F A WCG CK L+P+
Sbjct: 50 SRLNALKDTNKLLVIEFTAKWCGPCKTLEPK 80
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 180 LVMFYAPWCGHCKRLKPEY 236
LV+ YAPWC C+ ++ Y
Sbjct: 366 LVVLYAPWCPFCQAMEASY 384
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -2
Query: 522 ESDNHTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGPLYSEESSP 370
+ +H+SS S+SA L PTW + + P + P Y + +P
Sbjct: 19 QQSSHSSSTNRYNSRSAQSSPPLNHRPTWNQQHSQYPNSNFPPNYRRDRNP 69
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 138 DSDFSAVLSQHDTAL--VMFYAPWCGHCKRLKPEYAVAAGL 254
DS + SQH A V+FYA WC + ++P++ + + +
Sbjct: 62 DSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFDMLSSM 102
>At5g38010.1 68418.m04578 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 453
Score = 28.3 bits (60), Expect = 5.7
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
Frame = -2
Query: 567 SCFQELSFQVRFLFEESDNHTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGPLY 388
S F + V D T+S + + SSLE W + L +P+ +GPL+
Sbjct: 188 SAFAPVEASVEVFKSSCDKGTASAMIINTVRCLEISSLE----WLQQELKIPIYPIGPLH 243
Query: 387 SEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLASATGG-TSVFTGRXLPHTLALVSYN 211
S+P ++ + E+C L S + + G T + T L LVS N
Sbjct: 244 MVSSAPPTSLLD----ENESCIDWLNKQKPSSVIYISLGSFTLLETKEVLEMASGLVSSN 299
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 138 DSDFSAVLSQHDTALVM-FYAPWCGHCKRLKPEY 236
D+ + V + D +V+ Y WCG CK + P+Y
Sbjct: 86 DTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKY 119
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +2
Query: 287 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVG 445
K+DC + K ++ + PT KI + ++ E G + + + A+ G
Sbjct: 133 KLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLLAAIEAARSG 185
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 28.3 bits (60), Expect = 5.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 180 LVMFYAPWCGHCKRLKPEY 236
+V+ YAPWC C+ ++ Y
Sbjct: 377 IVVLYAPWCPFCQAMEASY 395
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 153 AVLSQHDTALVMFYAPWCGHCK 218
+VL LV FY WCG C+
Sbjct: 79 SVLKSETPVLVEFYTSWCGPCR 100
>At1g69850.1 68414.m08039 nitrate transporter (NTL1) identical to
nitrate transporter (NTL1) GI:3377517 [Arabidopsis
thaliana]
Length = 585
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +2
Query: 236 CGSXRPVKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNG----PR 403
CGS P+ T + + A V C G S+ S+S P+ KG+ E G PR
Sbjct: 243 CGS--PLTTILKVLLAASVKCCSSGSSSNAVASMSVSPSNHCVSKGKKEVESQGELEKPR 300
Query: 404 ESNGIVKYMRAQVGPSSKELLTVAD 478
+ + RAQ+ S K L AD
Sbjct: 301 QEEALPP--RAQLTNSLKVLNGAAD 323
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 162 SQHDTALVMFYAPWCGHCKRLKP 230
SQ +VMF A WCG C+ + P
Sbjct: 225 SQTPHVMVMFTARWCGPCRDMIP 247
>At1g08440.1 68414.m00933 hypothetical protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 501
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 18 VRFC*KAPAKFKMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALV--MF 191
VRF + A++ +G L F+L +I + E+++LDL S V+ + ++ +F
Sbjct: 121 VRFFPRVKARYD-YGVLIFILTFALISVSGFREDEILDLAHKRLSTVIMGGVSCVLISIF 179
Query: 192 YAP-WCG 209
P W G
Sbjct: 180 VCPVWAG 186
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 27.5 bits (58), Expect = 10.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 147 FSAVLSQHDTALVMFYAPWCGHCKRLKP 230
F+ + + +V F A WCG C+ ++P
Sbjct: 40 FNEIKESNKLLVVDFSASWCGPCRMIEP 67
>At3g43270.1 68416.m04567 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 527
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 42 AKFKMFGSLKFVLLLGIIYLCKAAEE 119
AKF+ GS F L L II LC A +E
Sbjct: 2 AKFRQMGSSIFFLFLIIISLCSAHKE 27
>At1g61970.1 68414.m06990 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 418
Score = 27.5 bits (58), Expect = 10.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 508 MVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLY 657
+++ EK K +FL++ E+T SS E+L K G+K V Y
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYY 160
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 27.5 bits (58), Expect = 10.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 147 FSAVLSQHDTALVMFYAPWCGHCKRLKP 230
F ++ + ++ F A WCG CK ++P
Sbjct: 36 FDSMKGSNKLLVIDFTAVWCGPCKAMEP 63
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,178,726
Number of Sequences: 28952
Number of extensions: 337728
Number of successful extensions: 1106
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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