Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0562.Seq
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B553A Cluster: PREDICTED: similar to Vps8 prote...    36   0.95 
UniRef50_UPI0000D55AC1 Cluster: PREDICTED: similar to CG10144-PA...    35   1.7  
UniRef50_UPI0000519A3C Cluster: PREDICTED: similar to CG10144-PA...    33   5.1  

>UniRef50_UPI00015B553A Cluster: PREDICTED: similar to Vps8 protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Vps8
           protein - Nasonia vitripennis
          Length = 1208

 Score = 35.9 bits (79), Expect = 0.95
 Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
 Frame = +2

Query: 371 LDIEELDEIEYALPAID-APTLAEVL 445
           LDIEELD+ EYA+PA+D  P+L  +L
Sbjct: 26  LDIEELDDAEYAIPAVDKLPSLESIL 51


>UniRef50_UPI0000D55AC1 Cluster: PREDICTED: similar to CG10144-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG10144-PA - Tribolium castaneum
          Length = 1170

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +2

Query: 371 LDIEELDEIEYALPAIDAPTLAEVLCVSEEEE 466
           LDI EL+++E+ +P++ AP+L  VL   E EE
Sbjct: 18  LDIRELNDLEFDIPSVAAPSLESVLWDMESEE 49


>UniRef50_UPI0000519A3C Cluster: PREDICTED: similar to CG10144-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG10144-PA - Apis mellifera
          Length = 1184

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = +2

Query: 371 LDIEELDEIEYALPAI-DAPTLAEVL 445
           LDIEELD  EYA+PA+ + P+L  +L
Sbjct: 23  LDIEELDNTEYAIPAVEELPSLESIL 48


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,065,042
Number of Sequences: 1657284
Number of extensions: 9588714
Number of successful extensions: 21475
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21465
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)