Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0561.Seq
(823 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383... 90 2e-18
06_01_0981 + 7613381-7614086,7614203-7614282,7614883-7614960,761... 89 3e-18
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403 60 2e-09
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 31 0.84
03_01_0515 - 3864796-3865425 31 1.1
03_01_0415 + 3191392-3191952 31 1.1
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 31 1.5
02_01_0302 - 2021221-2023305 31 1.5
12_02_1174 - 26696869-26698191 29 3.4
10_06_0179 - 11508235-11508245,11508555-11508942 29 3.4
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 29 3.4
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 29 3.4
12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 29 4.5
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.5
04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 29 4.5
01_06_0061 - 26071984-26072343,26072792-26073139,26073228-260733... 29 5.9
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 7.8
05_03_0258 - 11153709-11156090 28 7.8
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 28 7.8
01_07_0254 + 42318181-42319471,42319581-42319792,42319909-423201... 28 7.8
>02_05_0689 -
30937621-30937665,30938143-30938208,30938303-30938356,
30938489-30938560,30938648-30938743,30939883-30939960,
30940485-30940564,30940662-30941343
Length = 390
Score = 89.8 bits (213), Expect = 2e-18
Identities = 39/72 (54%), Positives = 53/72 (73%)
Frame = +3
Query: 282 PATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMR 461
P+ T T + L + ++++RR+E A+ +LYK K+IRGFCHLY GQEAVAVGM AA+
Sbjct: 49 PSRDVTTTPAELLTFFRDMSVMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAIT 108
Query: 462 DADSVITAYRCH 497
+DS+ITAYR H
Sbjct: 109 RSDSIITAYRDH 120
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
Frame = +2
Query: 554 RRTGCSRGKGGSMHLYGR--NFYGGNGIVGAQVPLGAGVXFAHKYRAD 691
R+ GCSRGKGGSMH Y + NFYGG+GIVGAQVPLG G+ FA KYR +
Sbjct: 140 RQAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYRKE 187
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/59 (40%), Positives = 31/59 (52%)
Frame = +1
Query: 646 PVGSWSGLRPQVPRRRGVTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTALG 822
P+G + + TFALYGDGAANQGQL + N+ LW LP + V +G
Sbjct: 173 PLGCGLAFAQKYRKEETATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMG 231
>06_01_0981 +
7613381-7614086,7614203-7614282,7614883-7614960,
7615166-7615261,7615370-7615441,7615676-7615729,
7615819-7615884,7616291-7616335
Length = 398
Score = 89.4 bits (212), Expect = 3e-18
Identities = 43/81 (53%), Positives = 55/81 (67%)
Frame = +3
Query: 255 YKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAV 434
YK H +D P AT T+ + + ++ +RR E A+ +LYK K+IRGFCHLY GQEAV
Sbjct: 49 YKSHIVDPPPREVAT-TARELATFFRDMSAMRRAEIAADSLYKAKLIRGFCHLYDGQEAV 107
Query: 435 AVGMRAAMRDADSVITAYRCH 497
AVGM AA AD++ITAYR H
Sbjct: 108 AVGMEAATTRADAIITAYRDH 128
Score = 77.8 bits (183), Expect = 1e-14
Identities = 35/48 (72%), Positives = 40/48 (83%), Gaps = 2/48 (4%)
Frame = +2
Query: 554 RRTGCSRGKGGSMHLYGR--NFYGGNGIVGAQVPLGAGVXFAHKYRAD 691
RR GCSRGKGGSMHLY + NFYGG+GIVGAQVPLG G+ FA +YR +
Sbjct: 148 RRGGCSRGKGGSMHLYKKDANFYGGHGIVGAQVPLGCGLAFAQRYRKE 195
Score = 54.8 bits (126), Expect = 8e-08
Identities = 26/59 (44%), Positives = 31/59 (52%)
Frame = +1
Query: 646 PVGSWSGLRPQVPRRRGVTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTALG 822
P+G + + VTF LYGDGAANQGQL + NM LW LP V V +G
Sbjct: 181 PLGCGLAFAQRYRKEAAVTFDLYGDGAANQGQLFEALNMAALWKLPVVLVCENNHYGMG 239
>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
Length = 425
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/78 (37%), Positives = 43/78 (55%)
Frame = +3
Query: 264 HKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVG 443
+K A + +T E+AL+LYE + + R E +Y + GF HLY+GQEAV+ G
Sbjct: 61 NKAAPAAAAHSAVTREEALELYEDMVLGRIFEDMCAQMYYRGKMFGFVHLYNGQEAVSTG 120
Query: 444 MRAAMRDADSVITAYRCH 497
+ AD V++ YR H
Sbjct: 121 FIKLLNQADCVVSTYRDH 138
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +2
Query: 554 RRTGCSRGKGGSMHLYG--RNFYGGNGIVGAQVPLGAGVXFAHKYR 685
+ TGC RG+GGSMH++ N GG +G +P+ G FA KYR
Sbjct: 158 KATGCCRGQGGSMHMFSEPHNLLGGFAFIGEGIPVATGAAFAAKYR 203
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +1
Query: 667 LRPQVPRRRGVTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTALG 822
L+ P VT A +GDG N GQ NM +LW LP VFV + A+G
Sbjct: 207 LKQSSPDGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVENNLWAIG 258
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 633 TIPLPP*KLRP-YKCMEPPLPREQPVLRPVSSESTPST 523
TIP+PP P M PP P +QP P S TP T
Sbjct: 405 TIPMPPIIAAPAITVMPPPAPSQQPQPPPPPSHPTPIT 442
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/63 (33%), Positives = 24/63 (38%)
Frame = -2
Query: 717 SVQSERDSPSARYLWAKXTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSE 538
SV S P+A L P P+ T +P P P P PP P P PV S
Sbjct: 56 SVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSS 115
Query: 537 STP 529
P
Sbjct: 116 PPP 118
>03_01_0415 + 3191392-3191952
Length = 186
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = -2
Query: 723 SVSVQSERDSPSARYLWAKXTPAPNGTCAPT-IPLPP*KLRPYKCME---PPLPREQPVL 556
++S+ PS LWA PA + + P+ +P+P L + + PP R V+
Sbjct: 85 AISISPSTSPPSRPELWAG--PAFSNSPPPSSLPIPKFSLHQKRSVSLELPPAGRSDDVV 142
Query: 555 RPVSSESTPSTLTPMS--KSIRDNDT 484
P+ ++S PS+ T S D+DT
Sbjct: 143 VPLHAKSAPSSPTAGSGVSFFSDSDT 168
>03_05_0524 -
25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Frame = -2
Query: 729 GGSVSVQSERDSPSARYLWAKXTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLR- 553
GG V + SP + P P T P I P + P M PLP PV
Sbjct: 338 GGCEEVPALSPSPPPLHGSVMPPPLPPATVEPVISAPMVEPPPPPAMITPLPPSTPVFTL 397
Query: 552 --PVSSESTPSTLTPMSKS 502
P + PST P S
Sbjct: 398 PPPPPVTTAPSTALPAGAS 416
>02_01_0302 - 2021221-2023305
Length = 694
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = -2
Query: 729 GGSVSVQSERDSPSARYLWAKXTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQP--VL 556
GGS S SP+ P+P G+ P+ P PP PP P
Sbjct: 461 GGSSSTTPSYPSPNGGKPSTPSHPSPPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPS 520
Query: 555 RPVSSESTPSTLTPMS 508
P SS + PS P S
Sbjct: 521 PPSSSTAPPSHSPPQS 536
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Frame = -2
Query: 702 RDSPSARYLWAKXTPAPNGTCAPTIPLPP*KLRPYKCMEP---PLPREQPVLRPVSSEST 532
R P R K P P+ P P PP RP P P P+ P L+P S
Sbjct: 134 RVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPP 193
Query: 531 PSTLTPMSK 505
P T P K
Sbjct: 194 PPTRPPSVK 202
>10_06_0179 - 11508235-11508245,11508555-11508942
Length = 132
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/77 (32%), Positives = 31/77 (40%)
Frame = -2
Query: 756 VASKKLTLVGGSVSVQSERDSPSARYLWAKXTPAPNGTCAPTIPLPP*KLRPYKCMEPPL 577
VA+ LV +V SPSA A P P AP +P PP P P+
Sbjct: 6 VAAAAAALVAILSAVAVTAQSPSAAPKMAPLPPPPK--MAP-LPPPPAAKAPTASAPSPV 62
Query: 576 PREQPVLRPVSSESTPS 526
P P+S S+PS
Sbjct: 63 TAASPPAPPMSPASSPS 79
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2
Query: 654 PNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTP 529
P AP PP RP + PP P Q +LRP+ +ES P
Sbjct: 207 PMAAPAPPQTNPP---RPVRPPPPPPPPRQRLLRPLPAESPP 245
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -2
Query: 726 GSVSVQSERDSPSARYLWAKXTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPV 547
G SV+S DS R P P APT+P PP P + P P P++
Sbjct: 337 GRRSVKSRSDS--VRTFGQPPAPPPPPPFAPTLPPPP---PPRRKPPSPSPPSSPLIENT 391
Query: 546 SS-ESTPSTLTPMSKS 502
S+ ST +T T + ++
Sbjct: 392 SALRSTTTTDTTIPRN 407
>12_02_0370 +
18139557-18140469,18140561-18140704,18140804-18140956,
18141032-18141147,18141231-18141398,18142110-18142334,
18142458-18142577
Length = 612
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 660 PAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTP 514
P P P P P + +P +PP P+EQP P +S +T P
Sbjct: 62 PVPVVISEPPPPQPQPEPQPAAPSQPPPPQEQPSPPPPASSNTTQQPPP 110
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -2
Query: 663 TPAPNGTCAPTIPLPP*KLR-----PYKCMEPPLPREQPVLRPVSSESTPSTL 520
TP P +P++P PP P + PPLP + P + P S+PS+L
Sbjct: 1168 TPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVPSSPSSL 1220
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = -2
Query: 714 VQSERDSPSARYLWAKXTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPRE----QPVLRPV 547
+Q E D A + P P+G P +PL P PPLP + QP L P
Sbjct: 1106 LQHEIDREQALADQNELPPLPDGP--PPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPS 1163
Query: 546 SSESTPSTLTPMSKSI 499
+TP P+S S+
Sbjct: 1164 PPPATPPPPPPLSPSL 1179
>04_04_0779 -
28023735-28024058,28024520-28024618,28024704-28024940,
28025227-28025334,28025427-28025486,28025813-28025888,
28025984-28026144,28026374-28026436,28026543-28026630,
28026872-28027612,28027695-28028239
Length = 833
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 653 PTGPAHQQSRCHHRSCVRTNAWNLPCPG 570
PT P+ + SRC S R +A LP PG
Sbjct: 64 PTSPSKEVSRCQSFSADRPHAHPLPIPG 91
>01_06_0061 -
26071984-26072343,26072792-26073139,26073228-26073371,
26073454-26073723,26075019-26075825
Length = 642
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = -3
Query: 278 LIQFMEFVGLISNVASFFVLYFAFVATTGAVTFVIVFPAKNL 153
++ + + ++S A F+ + F F+A GA FV+ +P +N+
Sbjct: 174 MLLYTKLSNVLSREALFYTVIFPFIAFFGAFAFVL-YPLRNV 214
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 663 TP-APNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTP 529
TP PN +PT+P PP P + PP+ P RP+ + P
Sbjct: 44 TPLTPNPNPSPTLPPPPMSTPPV--VAPPMHSFAPSFRPLGAPPPP 87
>05_03_0258 - 11153709-11156090
Length = 793
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = -2
Query: 645 TCAPTIPLPP*KLRPYKCMEPP----LPREQPVLRPVSSESTPSTLTPMSKSIRD 493
T AP P PP RP+ PP P Q ++ +SS+ PS L S RD
Sbjct: 53 TAAPPPPQPPATRRPHPTPTPPHSFLSPAAQSLVAAISSQPLPS-LPAFLSSRRD 106
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = -2
Query: 735 LVGGSVSVQSERDSPSARYLWAKXTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVL 556
L GS S S + +A L P P P P PP + P + PP P +QP L
Sbjct: 550 LAAGS-STPSSSQAMTAAALAPPSPPEPPSPRHPPSP-PPLRSPPRQPTPPPSPSQQPPL 607
Query: 555 ---RPVSSESTPST 523
+PV + T T
Sbjct: 608 PTPQPVQASPTSPT 621
>01_07_0254 +
42318181-42319471,42319581-42319792,42319909-42320132,
42320232-42321009
Length = 834
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -2
Query: 672 AKXTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSKSIRD 493
A TP P+G+ +P + LPP P K ++ + L P S S+ ST++P+S ++ D
Sbjct: 82 APGTP-PSGS-SPVLTLPP---SPAKPVDASAAAARSSLPP--SPSSSSTVSPLSHTLSD 134
Query: 492 ND 487
D
Sbjct: 135 ED 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,943,208
Number of Sequences: 37544
Number of extensions: 511797
Number of successful extensions: 1824
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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