Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0561.Seq
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 139 2e-33
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 139 2e-33
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 31 1.3
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z78539-4|CAB01731.1| 591|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 3.0
U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein. 29 3.0
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 29 3.0
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo... 29 3.0
U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryo... 29 3.0
U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryo... 29 3.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 3.0
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 29 3.0
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 29 3.0
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.0
AF077542-2|AAC26294.1| 244|Caenorhabditis elegans Hypothetical ... 29 3.0
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 29 4.0
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 29 4.0
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 29 4.0
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 4.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 5.3
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 5.3
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z83239-8|CAH60787.1| 311|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z83225-1|CAB05721.1| 324|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z81045-6|CAB02820.1| 324|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 28 9.3
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 139 bits (337), Expect = 2e-33
Identities = 61/84 (72%), Positives = 71/84 (84%)
Frame = +3
Query: 258 KLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVA 437
KLHKLD GP TS TL EDALK Y + ++RR+E+A+GNLYKEK IRGFCHLYSGQEA A
Sbjct: 53 KLHKLDNGPNTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACA 112
Query: 438 VGMRAAMRDADSVITAYRCHGWTY 509
VGM+AAM + D+VITAYRCHGWT+
Sbjct: 113 VGMKAAMTEGDAVITAYRCHGWTW 136
Score = 72.1 bits (169), Expect = 4e-13
Identities = 39/71 (54%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = +2
Query: 554 RRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVXFAHKYRADGESRSLCTETEPPT 733
R G GKGGSMH+Y +NFYGGNGIVGAQ PLGAGV A KYR E +++C
Sbjct: 152 RVAGNVHGKGGSMHMYTKNFYGGNGIVGAQQPLGAGVALAMKYR---EQKNVCVTLYGDG 208
Query: 734 RVN---FFEAT 757
N FEAT
Sbjct: 209 AANQGQLFEAT 219
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +1
Query: 646 PVGSWSGLRPQVPRRRGVTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTALG 822
P+G+ L + ++ V LYGDGAANQGQL + NM KLWDLP +FV +G
Sbjct: 183 PLGAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMG 241
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 139 bits (337), Expect = 2e-33
Identities = 61/84 (72%), Positives = 71/84 (84%)
Frame = +3
Query: 258 KLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVA 437
KLHKLD GP TS TL EDALK Y + ++RR+E+A+GNLYKEK IRGFCHLYSGQEA A
Sbjct: 36 KLHKLDNGPNTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACA 95
Query: 438 VGMRAAMRDADSVITAYRCHGWTY 509
VGM+AAM + D+VITAYRCHGWT+
Sbjct: 96 VGMKAAMTEGDAVITAYRCHGWTW 119
Score = 72.1 bits (169), Expect = 4e-13
Identities = 39/71 (54%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = +2
Query: 554 RRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVXFAHKYRADGESRSLCTETEPPT 733
R G GKGGSMH+Y +NFYGGNGIVGAQ PLGAGV A KYR E +++C
Sbjct: 135 RVAGNVHGKGGSMHMYTKNFYGGNGIVGAQQPLGAGVALAMKYR---EQKNVCVTLYGDG 191
Query: 734 RVN---FFEAT 757
N FEAT
Sbjct: 192 AANQGQLFEAT 202
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +1
Query: 646 PVGSWSGLRPQVPRRRGVTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTALG 822
P+G+ L + ++ V LYGDGAANQGQL + NM KLWDLP +FV +G
Sbjct: 166 PLGAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMG 224
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2
Query: 630 IPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTP 529
+P P PY C PP P PV P + + P
Sbjct: 109 VPAPAPVYEPYACAAPPCPPPTPVYEPYACAAPP 142
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = -2
Query: 654 PNGTCAPTIPLPP*KLRPYKCMEPPLP---REQPVLRPV 547
P AP P P PY C PP P QPV++ V
Sbjct: 118 PYACAAPPCPPPTPVYEPYACAAPPCPAPVAPQPVIQHV 156
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 651 NGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVS-SESTPST 523
+ T +P PP + P P PR +P+ +P S S +TP T
Sbjct: 110 DATVKTVVPRPPTPIPPTGVKPEPAPRSEPLYQPRSVSSTTPRT 153
>Z78539-4|CAB01731.1| 591|Caenorhabditis elegans Hypothetical
protein C31E10.6 protein.
Length = 591
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 204 DKRKIQHEKRGDIRNQAYKLHKLD-QGPATSATLTSEDALKLYEQLT-ILRRIETASGNL 377
DK+K EKR +I Y L K++ AT + D+ L + +T +L+RI + ++
Sbjct: 91 DKKKTASEKRSEIAQIIYALQKINCPFDATEQEFLNVDSSVLVDIITWVLQRISRQTMDM 150
Query: 378 YKEKIIRG-FCHLYSGQEAVAVGMRAAMR 461
+ K F Y + A A+ +++R
Sbjct: 151 DRFKCFMACFNMKYEDEAAAALDFISSLR 179
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 258 CRLD-FECRLF-FRAVFCVCRYNRCSHFRDCVSG 163
C+ D ++C + + +V C+ Y RC + DC G
Sbjct: 92 CKSDQWQCDTYTWHSVSCIAEYQRCDNITDCADG 125
>U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.
Length = 1379
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 168 KHNHESDCTGCSDKRKIQHEKRGDIRNQAYKLHKLDQGPATSATLTSEDALKLYEQLTIL 347
KH ++ S +++ + + R + KL P T+A S ++ L + +
Sbjct: 886 KHQRQNSAPTSSTQKRSKSQPRSSSQRNYRSPMKLVDLPTTAAASASTNSQNLDDSDMLN 945
Query: 348 RRIET-ASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRD 464
RR ++ S N E I+RG + +G + M+AA D
Sbjct: 946 RRSQSMESINRPVESILRGTGQIPTGSSSKVQFMQAASPD 985
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 339 TILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADS 473
T+ RRIET + K+ R LY+G E A G + + DAD+
Sbjct: 171 TLERRIETEKETIDIFKMTRESLGLYAGIEGGATGSKLVIIDADT 215
>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform c protein.
Length = 1340
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 168 KHNHESDCTGCSDKRKIQHEKRGDIRNQAYKLHKLDQGPATSATLTSEDALKLYEQLTIL 347
KH ++ S +++ + + R + KL P T+A S ++ L + +
Sbjct: 850 KHQRQNSAPTSSTQKRSKSQPRSSSQRNYRSPMKLVDLPTTAAASASTNSQNLDDSDMLN 909
Query: 348 RRIET-ASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRD 464
RR ++ S N E I+RG + +G + M+AA D
Sbjct: 910 RRSQSMESINRPVESILRGTGQIPTGSSSKVQFMQAASPD 949
>U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform a protein.
Length = 1376
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 168 KHNHESDCTGCSDKRKIQHEKRGDIRNQAYKLHKLDQGPATSATLTSEDALKLYEQLTIL 347
KH ++ S +++ + + R + KL P T+A S ++ L + +
Sbjct: 886 KHQRQNSAPTSSTQKRSKSQPRSSSQRNYRSPMKLVDLPTTAAASASTNSQNLDDSDMLN 945
Query: 348 RRIET-ASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRD 464
RR ++ S N E I+RG + +G + M+AA D
Sbjct: 946 RRSQSMESINRPVESILRGTGQIPTGSSSKVQFMQAASPD 985
>U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform b protein.
Length = 1379
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 168 KHNHESDCTGCSDKRKIQHEKRGDIRNQAYKLHKLDQGPATSATLTSEDALKLYEQLTIL 347
KH ++ S +++ + + R + KL P T+A S ++ L + +
Sbjct: 886 KHQRQNSAPTSSTQKRSKSQPRSSSQRNYRSPMKLVDLPTTAAASASTNSQNLDDSDMLN 945
Query: 348 RRIET-ASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRD 464
RR ++ S N E I+RG + +G + M+AA D
Sbjct: 946 RRSQSMESINRPVESILRGTGQIPTGSSSKVQFMQAASPD 985
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 258 CRLD-FECRLF-FRAVFCVCRYNRCSHFRDCVSG 163
C+ D ++C + + +V C+ Y RC + DC G
Sbjct: 92 CKSDQWQCDTYTWHSVSCIAEYQRCDNITDCADG 125
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 649 VGSWSGLRPQVPRRRGVTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTAL 819
VGS + Q R + +GDGAA++G ++N P +F R A+
Sbjct: 201 VGSAYAFKQQKDNNR-IAVVYFGDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAI 256
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 649 VGSWSGLRPQVPRRRGVTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTAL 819
VGS + Q R + +GDGAA++G ++N P +F R A+
Sbjct: 200 VGSAYAFKQQKDNNR-IAVVYFGDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAI 255
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 603 PYKCMEPPLPREQPVL--RPVSSESTPSTLTPMSK 505
P K +PPLP+ P++ P S PST+T SK
Sbjct: 693 PEKIDKPPLPQAAPIIPKLPQKSIKAPSTVTTRSK 727
>AF077542-2|AAC26294.1| 244|Caenorhabditis elegans Hypothetical
protein Y57G7A.5 protein.
Length = 244
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 264 HKLDQGPATSATLTSE--DALKLYEQLTILRRIETASGNLYK-EKIIRGFCHLY 416
H LD+ L+ E D L ++ ++ R ETA GN+Y EK +R HLY
Sbjct: 50 HVLDEQTRLRTRLSEEFGDFLNRSKR-SLTRNFETADGNVYSFEKNLRELLHLY 102
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 609 LRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSK 505
+ P + PP+P PV+ PV S T + PM +
Sbjct: 229 ISPSTRVPPPIPSRAPVMSPVQSPLTHPPVAPMPR 263
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -2
Query: 660 PAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSKSIRDN 490
PA T A T P P K + ++PV +P S+++TP + S D+
Sbjct: 321 PAAKSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKPTSAKATPKPAAKKADSSSDS 377
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -2
Query: 660 PAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSKSIRDN 490
PA T A T P P K + ++PV +P S+++TP + S D+
Sbjct: 596 PAAKSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKPTSAKATPKPAAKKADSSSDS 652
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 630 IPLPP*KLRPYKCMEPPLPREQPVLRPVS-SESTPST 523
+P PP + P P PR +P+ +P S S +TP T
Sbjct: 115 VPRPPTPIPPTGVKPEPAPRSEPLYQPRSVSSTTPRT 151
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 609 LRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSK 505
+ P + PP+P PV+ PV S T + PM +
Sbjct: 229 ISPSTRVPPPIPSRAPVMSPVQSPLTHPPVAPMPR 263
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 645 TCAPTIPLPP*KL-RPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSKSI 499
T +P +P PP L P PP P +P +RP ++P P S+ +
Sbjct: 70 TESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPV 119
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 645 TCAPTIPLPP*KL-RPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSKSI 499
T +P +P PP L P PP P +P +RP ++P P S+ +
Sbjct: 292 TESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPV 341
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 15/53 (28%)
Frame = -2
Query: 276 DPIYGVCRLDFECRL---------FFRAVFCVCRYN------RCSHFRDCVSG 163
DP+ VC+ D+ CR+ F VCRY+ +C + DC+SG
Sbjct: 377 DPMATVCQFDYHCRMGESCSGRVRFVDRNVTVCRYDMFKKHRQCLYHSDCISG 429
>Z83239-8|CAH60787.1| 311|Caenorhabditis elegans Hypothetical
protein T09F5.16 protein.
Length = 311
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 739 QLLRSYNMLKLWDLPCVFVARTTVT 813
++ +S N+LK+W PCV ++R T
Sbjct: 274 EIFKSRNLLKIWCCPCVKLSRIQPT 298
>Z83225-1|CAB05721.1| 324|Caenorhabditis elegans Hypothetical
protein F42H11.1 protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 726 GSVSVQSERD---SPSARYLWAKXTPAPNGTCAPTIPLP 619
G S+ S++D +P R TP+P G+ AP+ P P
Sbjct: 39 GESSLSSKKDGAKTPDGREGSEAGTPSPGGSAAPSAPAP 77
>Z81045-6|CAB02820.1| 324|Caenorhabditis elegans Hypothetical
protein F42H11.1 protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 726 GSVSVQSERD---SPSARYLWAKXTPAPNGTCAPTIPLP 619
G S+ S++D +P R TP+P G+ AP+ P P
Sbjct: 39 GESSLSSKKDGAKTPDGREGSEAGTPSPGGSAAPSAPAP 77
>Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical
protein R06C7.8 protein.
Length = 987
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 174 NHESDCTGCSDKRKIQHEKRGDI 242
N+ES+ TGC +R+ + K+GDI
Sbjct: 624 NNESEITGCKIRRRSEIIKQGDI 646
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Frame = +1
Query: 145 SAAKFLAGNTITKVTAPVVATNAKYSTKKEATFE----IKPTNSI------NWIRALQHQ 294
SAA F++G T + A+YST +E F+ I T S+ N+ Q Q
Sbjct: 168 SAAAFVSGMTAVPIQIRGRTLFAQYSTHRELKFDKNKAISDTESVANGSVSNFEVGTQQQ 227
Query: 295 PHSLLKMLLSCM 330
P+S+L+ ++ M
Sbjct: 228 PNSVLRTIIENM 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,883,832
Number of Sequences: 27780
Number of extensions: 401391
Number of successful extensions: 1368
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -