Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0561.Seq
(823 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g59900.1 68414.m06748 pyruvate dehydrogenase E1 component alp... 87 1e-17
At1g24180.1 68414.m03050 pyruvate dehydrogenase E1 component alp... 86 2e-17
At1g01090.1 68414.m00011 pyruvate dehydrogenase E1 component alp... 60 1e-09
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 34 0.13
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 32 0.40
At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid t... 32 0.53
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 2.1
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 30 2.1
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 30 2.1
At5g60730.1 68418.m07620 anion-transporting ATPase family protei... 29 2.8
At5g49220.1 68418.m06093 expressed protein 29 2.8
At5g38560.1 68418.m04662 protein kinase family protein contains ... 29 2.8
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 2.8
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 29 2.8
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 2.8
At1g21400.1 68414.m02678 2-oxoisovalerate dehydrogenase, putativ... 29 3.7
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 4.9
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 29 4.9
At3g58510.2 68416.m06522 DEAD box RNA helicase, putative (RH11) ... 28 6.5
At3g58510.1 68416.m06521 DEAD box RNA helicase, putative (RH11) ... 28 6.5
At2g39650.1 68415.m04862 expressed protein contains Pfam profile... 28 6.5
At1g76290.1 68414.m08860 AMP-dependent synthetase and ligase fam... 28 6.5
At1g09575.1 68414.m01074 expressed protein contains Pfam domain,... 28 6.5
At4g36910.1 68417.m05232 CBS domain-containing protein contains ... 28 8.6
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 8.6
>At1g59900.1 68414.m06748 pyruvate dehydrogenase E1 component alpha
subunit, mitochondrial (PDHE1-A) identical to SP|P52901
Pyruvate dehydrogenase E1 component alpha subunit,
mitochondrial precursor (EC 1.2.4.1) (PDHE1-A)
{Arabidopsis thaliana}
Length = 389
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/72 (51%), Positives = 53/72 (73%)
Frame = +3
Query: 282 PATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMR 461
P+ S +S++ L + + ++RR+E A+ +LYK K+IRGFCHLY GQEAVA+GM AA+
Sbjct: 48 PSRSVESSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAIT 107
Query: 462 DADSVITAYRCH 497
D++ITAYR H
Sbjct: 108 KKDAIITAYRDH 119
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Frame = +2
Query: 554 RRTGCSRGKGGSMHLYGR--NFYGGNGIVGAQVPLGAGVXFAHKYRAD 691
R+ GCS+GKGGSMH Y + +FYGG+GIVGAQVPLG G+ FA KY +
Sbjct: 139 RQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVPLGCGIAFAQKYNKE 186
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +1
Query: 646 PVGSWSGLRPQVPRRRGVTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTALG 822
P+G + + VTFALYGDGAANQGQL + N+ LWDLP + V +G
Sbjct: 172 PLGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMG 230
>At1g24180.1 68414.m03050 pyruvate dehydrogenase E1 component alpha
subunit, mitochondrial, putative similar to SP|P52901
Pyruvate dehydrogenase E1 component alpha subunit,
mitochondrial precursor (EC 1.2.4.1) (PDHE1-A)
{Arabidopsis thaliana}; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 393
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +3
Query: 270 LDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMR 449
L + P+ S +SE+ L + + +RR+E A+ +LYK K+IRGFCHLY GQEA+AVGM
Sbjct: 48 LCESPSRSVETSSEEILAFFRDMARMRRMEIAADSLYKAKLIRGFCHLYDGQEALAVGME 107
Query: 450 AAMRDADSVITAYRCH 497
AA+ D++IT+YR H
Sbjct: 108 AAITKKDAIITSYRDH 123
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Frame = +2
Query: 554 RRTGCSRGKGGSMHLYGRN--FYGGNGIVGAQVPLGAGVXFAHKYRAD 691
R+TGCS GKGGSMH Y ++ FYGG+GIVGAQ+PLG G+ FA KY D
Sbjct: 143 RKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPLGCGLAFAQKYNKD 190
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +1
Query: 646 PVGSWSGLRPQVPRRRGVTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTALG 822
P+G + + VTFALYGDGAANQGQL + N+ LWDLP + V +G
Sbjct: 176 PLGCGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMG 234
>At1g01090.1 68414.m00011 pyruvate dehydrogenase E1 component alpha
subunit, chloroplast identical to pyruvate dehydrogenase
E1 alpha subunit GB:AAB86803 GI:2454182 from
[Arabidopsis thaliana]; identical to cDNA pyruvate
dehydrogenase E1 alpha subunit mRNA, nuclear gene
encoding plastid protein GI:2454181
Length = 428
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +3
Query: 288 TSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDA 467
TS +T E+ L+LYE + + R E +Y + GF HLY+GQEAV+ G + +
Sbjct: 75 TSLLITKEEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLTKS 134
Query: 468 DSVITAYRCH 497
DSV++ YR H
Sbjct: 135 DSVVSTYRDH 144
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 560 TGCSRGKGGSMHLYGR--NFYGGNGIVGAQVPLGAGVXFAHKYRADGESRSLCTETEPPT 733
TGC RG+GGSMH++ + N GG +G +P+ G F+ KYR R + +
Sbjct: 166 TGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVATGAAFSSKYR-----REVLKQDCDDV 220
Query: 734 RVNFFEATTC*N 769
V FF TC N
Sbjct: 221 TVAFFGDGTCNN 232
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 697 VTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTALG 822
VT A +GDG N GQ NM L+ LP +FV + A+G
Sbjct: 220 VTVAFFGDGTCNNGQFFECLNMAALYKLPIIFVVENNLWAIG 261
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 663 TPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLT 517
TP P P +P+ P P PP+P P + P++ ++PS LT
Sbjct: 61 TPPPMPMTPPPMPMTP---PPMPMAPPPMPMASPPMMPMTPSTSPSPLT 106
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -2
Query: 669 KXTPAPNGTCAPTIPLP-P*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSK 505
K PAP P P P K +P PP P+ +P P + + TP+ P K
Sbjct: 54 KPKPAPTPPKPKPAPAPTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTPAPTPPKPK 109
Score = 31.1 bits (67), Expect = 0.92
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = -2
Query: 741 LTLVGGSVSVQSERDSPSARYLWAKXTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQP 562
+T+V + + + + P+ A P P T APT P P +P PP P+ P
Sbjct: 17 ITIVSSAPAPKPPKPKPAP----APTPPKPKPTPAPTPPKP----KPKPAPTPPKPKPAP 68
Query: 561 VLRPVSSESTPSTLTPMSK 505
P + P+ P K
Sbjct: 69 APTPPKPKPAPAPTPPKPK 87
>At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 161
Score = 31.9 bits (69), Expect = 0.53
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -2
Query: 678 LWAKXTPAPNGTCAPTI---PLPP*KLRPYKCMEPPLPR-EQPVLRPVSSESTPST 523
L+ T A N C P+ P+P K +P +C PP P P RPV+ TP +
Sbjct: 18 LFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSPNPRPVTPPRTPGS 73
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 660 PAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPST-LTPMS 508
P+P+ + +P I +P P PP P P+ S TPST TP+S
Sbjct: 521 PSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPIS 572
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = -2
Query: 663 TP-APNGTCAPTIPLPP*K-LRPYKCMEPPLPR---EQPVLRPVSSESTPSTLTP 514
TP +P P IP PP P PPLP P++ P S PST TP
Sbjct: 569 TPISPGQNSPPIIPSPPFTGPSPPSSPSPPLPPVIPSPPIVGPTPSSPPPSTPTP 623
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -2
Query: 660 PAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTP 514
P P+ PT PP +P PP P P P TP T TP
Sbjct: 134 PPPSTPKPPTTKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPTP 182
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -2
Query: 660 PAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSKSI 499
P P C PT P P K P P P P +PV S P P K +
Sbjct: 62 PVPPPACPPTPPKPQPKPAP---PPEPKPAPPPAPKPVPCPSPPKPPAPTPKPV 112
>At5g60730.1 68418.m07620 anion-transporting ATPase family protein
low similarity to SP|O43681 Arsenical pump-driving
ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase)
(Arsenical resistance ATPase) (Arsenite-transporting
ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam
profile PF02374: Anion-transporting ATPase
Length = 391
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 ESDCTGCSDKRKIQHEKRGDIRNQA-YKLHKLDQGPATSATLTSEDALKLYEQL 338
ESDC CS +RK Q G I+N KL Q P A + ALK L
Sbjct: 335 ESDCKFCSIRRKEQTRVLGLIQNDTELSGLKLIQSPLLDAEIRGVPALKFMGDL 388
>At5g49220.1 68418.m06093 expressed protein
Length = 409
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 522 VCWGCSRS*RGAGPVAPGAREVPCICTDATSMVATGLLVRRSRWELE 662
VC G S S G+G V + T +V L RSRWEL+
Sbjct: 88 VCAGSSDSSSGSGRVLSDGSNLDRFLEHTTPVVPARLFPMRSRWELK 134
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 663 TPAPNGTCAPTIPLP-P*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTP 514
TP+P G P+ P P P P PP P P S+ + PSTL P
Sbjct: 145 TPSPPGE-TPSPPKPSPSTPTPTTTTSPPPPPATSASPPSSNPTDPSTLAP 194
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -2
Query: 660 PAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSKS 502
PA + + + P P L P P +PRE+P+ +P S T S S
Sbjct: 175 PATSASPPSSNPTDPSTLAPPPTPLPVVPREKPIAKPTGPASNNGNNTLPSSS 227
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -2
Query: 660 PAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPV-SSESTPSTLTPMSKS 502
P P+ + AP P PP P PP P + P P S+ TPS P S
Sbjct: 78 PQPSPS-APITPSPPSPTTPSNPRSPPSPNQGPPNTPSGSTPRTPSNTKPSPPS 130
>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
to gi_3883128_gb_AAC77827
Length = 133
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/86 (31%), Positives = 35/86 (40%)
Frame = -2
Query: 759 VVASKKLTLVGGSVSVQSERDSPSARYLWAKXTPAPNGTCAPTIPLPP*KLRPYKCMEPP 580
VV L LV SV Q+ +P+ L A TP P+ + T P P P P
Sbjct: 6 VVVFLFLALVASSVVAQAPGPAPTISPLPA--TPTPSQSPRATAPAPSPSANP----PPS 59
Query: 579 LPREQPVLRPVSSESTPSTLTPMSKS 502
P P + +ES P+ T S S
Sbjct: 60 APTTAPPVSQPPTESPPAPPTSTSPS 85
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = -2
Query: 660 PAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTPMSKS 502
P P T AP P P PP P E P P++S S P+ P +S
Sbjct: 101 PPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSPPTNPPPPPES 153
>At1g21400.1 68414.m02678 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 472
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/58 (22%), Positives = 24/58 (41%)
Frame = +1
Query: 646 PVGSWSGLRPQVPRRRGVTFALYGDGAANQGQLLRSYNMLKLWDLPCVFVARTTVTAL 819
P + G ++ ++ T GDG ++G N + + P VF+ R A+
Sbjct: 242 PQAAGVGYSLKMDKKNACTVTFIGDGGTSEGDFHAGLNFAAVMEAPVVFICRNNGWAI 299
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 636 PTIPLP-P*KLRPYKCMEPPLPREQPVLRPVSSESTPSTLTPM 511
PT+P P P P ++PP P +P P + P+T P+
Sbjct: 36 PTLPSPSPATKPPSPALKPPTPSYKPPTLPTTPIKPPTTKPPV 78
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 669 KXTPAPNGTCAPTIPLPP*KLRPYK-CMEPPLPREQPVLRPVSSESTPS 526
K +P+P T P++P P K P + PP P++ P P S+PS
Sbjct: 123 KKSPSPPPT--PSLPPPAPKKSPSTPSLPPPTPKKSPPPPPSHHSSSPS 169
>At3g58510.2 68416.m06522 DEAD box RNA helicase, putative (RH11)
similar to RNA helicase DBY protein [Mus musculus]
GI:3790186, SP|O00571 DEAD-box protein 3 (Helicase-like
protein 2) {Homo sapiens}; contains Pfam profiles
PF00270: DEAD/DEAH box helicase, PF00271: Helicase
conserved C-terminal domain; identical to cDNA DEAD box
RNA helicase, RH11 GI:3775998
Length = 612
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 557 RTGCSRGKGGSMHLYGRNFYGGNGIVGA-QVPLGAGVXFA 673
R G G GG YG YGG G GA GAGV A
Sbjct: 571 RGGGGGGGGGGSDYYGGGGYGGGGYGGAPSGGYGAGVTSA 610
>At3g58510.1 68416.m06521 DEAD box RNA helicase, putative (RH11)
similar to RNA helicase DBY protein [Mus musculus]
GI:3790186, SP|O00571 DEAD-box protein 3 (Helicase-like
protein 2) {Homo sapiens}; contains Pfam profiles
PF00270: DEAD/DEAH box helicase, PF00271: Helicase
conserved C-terminal domain; identical to cDNA DEAD box
RNA helicase, RH11 GI:3775998
Length = 612
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 557 RTGCSRGKGGSMHLYGRNFYGGNGIVGA-QVPLGAGVXFA 673
R G G GG YG YGG G GA GAGV A
Sbjct: 571 RGGGGGGGGGGSDYYGGGGYGGGGYGGAPSGGYGAGVTSA 610
>At2g39650.1 68415.m04862 expressed protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 291
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 118 IDKMSKLIPSAAKFLAGNTITKVTA--PVVATNAKYSTKKEATFEIKPTNSINWIRALQH 291
+D +++ S G T+ ++ V+ AK+S K+ + + P S+N++R+ H
Sbjct: 177 VDSYQRIMESLPVVYVG-TVARLNQFLQVMVDAAKFSLKQNS-MPLPPWRSLNYLRSKWH 234
Query: 292 QPH 300
PH
Sbjct: 235 SPH 237
>At1g76290.1 68414.m08860 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 546
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = +3
Query: 402 FCHLYSGQEAVAVGMRAAMRDAD---SVITAYRCHGWTYSWALVCWG 533
+ H + A AVG+ M+ + Y C GW Y W + +G
Sbjct: 197 YSHRGAYLNATAVGVMNEMKPMPVYLCTVPMYHCSGWCYIWTVTAFG 243
>At1g09575.1 68414.m01074 expressed protein contains Pfam domain,
PF04678: Protein of unknown function, DUF607
Length = 292
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 597 CTDATSMVATGLLVRRSRWELEW 665
C ATSMV GL R + WE W
Sbjct: 175 CGLATSMVQIGLFFRLTFWEFSW 197
>At4g36910.1 68417.m05232 CBS domain-containing protein contains
Pfam profile PF00571: CBS domain
Length = 236
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 139 IPSAAKFLAGNTITKVTAPV--VATNAKYSTKKEATFEIKPTNSIN 270
IPSA+ +T ++P V T ++ TKKE +KPT +++
Sbjct: 52 IPSASSAAGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVD 97
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = -2
Query: 708 SERDSPSARYLWAKXTPAPNGTCAPTIP---LPP*KLRPYKCMEPPLPREQPVLRPVSSE 538
S RD + + TP P P +P +PP +P PP P P R + S
Sbjct: 556 SNRDPLTTLHQPINKTPPPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSP 615
Query: 537 STPSTLTP 514
S P P
Sbjct: 616 SAPPPPPP 623
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,802,931
Number of Sequences: 28952
Number of extensions: 372348
Number of successful extensions: 1128
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1882599200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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