Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0560.Seq
(698 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 41 2e-04
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 37 0.003
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.12
SPAC23H4.07c |srp102||signal recognition particle receptor beta ... 31 0.16
SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|... 29 0.64
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 29 0.64
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 28 1.5
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 27 3.4
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 27 3.4
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 26 4.5
SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Ma... 26 4.5
SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual 26 4.5
SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 26 4.5
SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces po... 26 4.5
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 25 7.9
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 25 7.9
SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces pomb... 25 7.9
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 40.7 bits (91), Expect = 2e-04
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L +Q T ++ N+E N + D+ GQ+++R + + + KG+
Sbjct: 34 KTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIR-PLWRHYFTGTKGL 92
Query: 435 VFVIDSINIQKEIRDVAEYLYTILWIRSFRETQL 536
+FV+DS + I + + L+ I+ R R+ L
Sbjct: 93 IFVVDSAD-SNRISEARQELHRIISDREMRDCLL 125
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 36.7 bits (81), Expect = 0.003
Identities = 22/84 (26%), Positives = 44/84 (52%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E N + + D+ GQ+++R + + + +GI
Sbjct: 30 KTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIR-PLWRHYFQNTQGI 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTIL 506
+FV+DS N ++ I + E L +L
Sbjct: 89 IFVVDS-NDRERISEAHEELQRML 111
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 407 FKEFISQSLLSRQINYF-QCFIRSYILFNIFFHRSKSLSVLRVSESYKQQSLPESDRPIN 231
F FI+ S+ + F C + + I+ +F H SK L++ ++E Y + P RP N
Sbjct: 421 FTPFITNSIGFKYGYIFASCNLCASIVTFLFAHESKGLTLEEINELYLSDAKPWMSRPKN 480
Query: 230 NTEL 219
+E+
Sbjct: 481 LSEM 484
>SPAC23H4.07c |srp102||signal recognition particle receptor beta
subunit Srp102 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 31.1 bits (67), Expect = 0.16
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 539 LLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKSNQLQSVDS 667
LLI CNK D A+ ++ I+ LL+ E++ + K+ QL+S+ S
Sbjct: 143 LLIACNKFDLFTAQPAEKIQQLLKAELHNILEEKNLQLESIVS 185
>SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 29.1 bits (62), Expect = 0.64
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 433 IPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFI 311
+P+A +L C + P RST++N L EV S I SF+
Sbjct: 463 LPIAFILGCLVGILQHYIAP-RSTMYNSLFEVTGSIITSFL 502
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 29.1 bits (62), Expect = 0.64
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 532 NSPSNIVQQTGPAISKRKPSYQRITRKRNKFSSCDQIESTAVRRFRLKAT 681
+ P NI+ P +SKR ++ + NK S I ++ R+F K T
Sbjct: 285 SKPDNIMDSPSPKVSKRPSIVRQDSHDSNKLSRRPTINTSFDRKFSPKLT 334
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.9 bits (59), Expect = 1.5
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +1
Query: 136 RYITLLSLIVLAVTLIFWWIFS 201
+YI ++S+IVL +T + W++F+
Sbjct: 1440 QYINIISIIVLVLTSLAWFLFN 1461
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 338 YILFNIFFHRSKSLSVLRVSESYKQQSLPESDRPINN 228
Y+LF +FF S +SV+ E+Y SLP +N+
Sbjct: 252 YVLF-VFFSGSSGVSVVITDENYLPVSLPVYSPVLNS 287
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 508 HKIVYRYSATSLISFCILIESITNTIPLALL 416
H ++ + T+L SFC + ++N PL+LL
Sbjct: 615 HGPLHGFPLTNLQSFCTISSFLSNDFPLSLL 645
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 369 LPGQERLRNKFFEQHKSSAKGIVFVIDSI-NIQKEIRDVAEYLYT 500
L + L N FFE+ K+ + ++++DS+ ++ EIR + + T
Sbjct: 440 LAEDQLLLNNFFEELKNKLESDLYLLDSVFDLVPEIRSLLQQFST 484
>SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 535
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 393 NKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYT-ILWIRSF 521
N F +H S KGIVFV D+ ++Q ++D ++L +L++R +
Sbjct: 363 NVFAARHLSEVKGIVFV-DAGSVQ-TLKDSGQFLSRFLLFVRGW 404
>SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual
Length = 324
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -1
Query: 437 HNSLSTTLVLFKEFISQSLLSRQIN--YFQCF-IRSYILFNIF 318
HNSLST L + S L + IN +F F + + LF IF
Sbjct: 202 HNSLSTNAALSASVVLASRLEKSINVFFFILFAVHWFALFPIF 244
>SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 687
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 469 SFCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFI 311
SFC+ + ++T + ALL+ + +L + P I ++L +I +FSF+
Sbjct: 523 SFCVFLVALTRVVSFALLIPIAFDLAI---IP--KVIIAIILIIIQGLVFSFM 570
>SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = -1
Query: 491 VFCYISD-FFLYIDRINHKHNSLSTTLVLFKEFISQSLLSRQINYFQCFIRSYILFNIF 318
+F + +D + L + + + + SLSTT+ LFK+ + + LS I+Y +I NIF
Sbjct: 363 IFFFGTDRYSLPLYKTHARRFSLSTTIHLFKKIV-RITLSTFISYTWIPFLLFIFLNIF 420
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 374 RQINYFQCFIRSYILFNIFFH-RSKSLSVLRVSESYKQQSLPESDRPINNTELRR 213
RQ YF+CF ++ + N F + K L+ +S ++ S E+ N++ + R
Sbjct: 15 RQPTYFRCFHKTTVHLNSFKNDPKKELNSNLNEKSVEESSKNETKEQFNSSSIPR 69
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 487 NTYTQSCGSDHSGKHNSPSNIVQQTGPAISKRKPSYQRI 603
N Y ++ S S SPS++ Q++ + KP QR+
Sbjct: 7 NAYLKNGNSTPSNDKRSPSSLSQRSKTSTRSSKPFLQRL 45
>SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 162
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +1
Query: 160 IVLAVTLIFWWIF--SRRYTLRNSVLLMGL 243
+ +TL+F+W+F SRR + ++L+ G+
Sbjct: 48 VFFLLTLVFYWVFDLSRRRATQLTILVCGV 77
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,826,887
Number of Sequences: 5004
Number of extensions: 59072
Number of successful extensions: 216
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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