Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0559.Seq
         (812 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 601  EEFSFQTTITRILRGVSTP 657
            EE+    TI R+LRG + P
Sbjct: 2177 EEYPLLRTINRVLRGYAKP 2195


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 104 MHRTGIVKFFVNISSIDFTQALHYESLNYIND 199
           MH+     F  N++++D T A   + +NY  D
Sbjct: 103 MHKKSFKNFVNNVAALDETLAKLGQYINYETD 134


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 543 FFILEIYIICNLFNNSILSGRV 608
           FFI+ +  ICN   N++   R+
Sbjct: 278 FFIVNVLYICNQCYNTVEESRI 299


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 356 VRAGLPVCQTMRLINLHYFAVSFDFNKV 439
           VRA L +C   R     Y A + D NK+
Sbjct: 535 VRAFLGLCNFYRKFCARYSAATQDLNKL 562


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/27 (22%), Positives = 16/27 (59%)
 Frame = +2

Query: 77   IIYEYFFVLMHRTGIVKFFVNISSIDF 157
            ++ ++F +++HR G     +  + +DF
Sbjct: 1295 MVIQFFAMMIHRFGTFSQIITKTQLDF 1321


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/27 (22%), Positives = 16/27 (59%)
 Frame = +2

Query: 77   IIYEYFFVLMHRTGIVKFFVNISSIDF 157
            ++ ++F +++HR G     +  + +DF
Sbjct: 1295 MVIQFFAMMIHRFGTFSQIITKTQLDF 1321


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +2

Query: 101  LMHRTGIVKFFVNISSID--FTQALHYESLNY 190
            L+HR  IVKF   I + D    Q ++Y+   +
Sbjct: 1177 LIHRKKIVKFLDGIMAFDIQLKQVVNYKKKKF 1208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,959
Number of Sequences: 336
Number of extensions: 3937
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)