Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0558.Seq
         (449 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   1.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   1.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   3.6  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   6.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   8.2  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 391 GAFTSGCHGSPIKT 432
           G+FT+GCH + + T
Sbjct: 72  GSFTAGCHSNLLST 85


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 391 GAFTSGCHGSPIKT 432
           G+FT+GCH + + T
Sbjct: 72  GSFTAGCHSNLLST 85


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 289 RLPEEETGHGNADQEGCPCK*EEQRWPDS 375
           RL + E     ADQEG   + +E+ +P+S
Sbjct: 677 RLIKRELVDAPADQEGDDDQVDEREYPES 705


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 388 GNMKWSLAIFVLLIY 344
           GN++W LA  +LL++
Sbjct: 170 GNIRWELAGTLLLVW 184


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 267  PLHCAAPASTRRGNRSWK 320
            PL  +   +T +GN  WK
Sbjct: 1004 PLKISLDVNTPKGNMQWK 1021


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 376 WSLAIFVLLIYTGTLP 329
           WSL + +  + TGT P
Sbjct: 549 WSLGVLMFELLTGTPP 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,896
Number of Sequences: 438
Number of extensions: 2264
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)