Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0557.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.2  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   5.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 295  VPIKPKSVPAPAGNKMP 345
            VP+K  +VP P+G+  P
Sbjct: 1104 VPLKGTAVPPPSGSSGP 1120


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 624 EVGIAFVRGADVGSLATLV 568
           ++ I  +RGA++G L TL+
Sbjct: 112 QLWIKQIRGAELGGLGTLI 130


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory
          receptor candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 99 NYNPRCFCYCLRVILI 52
          NYN    CY LR++LI
Sbjct: 48 NYNFTKKCYFLRMVLI 63


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 475 NNMPVWELQQPIS 513
           +N P WE  QP+S
Sbjct: 70  SNRPWWERYQPVS 82


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 475 NNMPVWELQQPIS 513
           +N P WE  QP+S
Sbjct: 71  SNRPWWERYQPVS 83


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 475 NNMPVWELQQPIS 513
           +N P WE  QP+S
Sbjct: 71  SNRPWWERYQPVS 83


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 447 LNKFDCTCREQYAG 488
           +N F C C+E + G
Sbjct: 87  INAFQCICKEGWEG 100


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 244 NEKTKANSNLIRVTNNIVPIKPKSV 318
           NE T    NL+R  +   PI PK +
Sbjct: 170 NEFTTHVMNLLREQSRTRPITPKEI 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,789
Number of Sequences: 336
Number of extensions: 4007
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)