Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0557.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 30 2.1
SB_17590| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 2.1
SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35) 29 3.6
SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_17067| Best HMM Match : TP2 (HMM E-Value=4.1) 29 4.8
SB_57269| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_47113| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 28 6.3
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08) 28 6.3
SB_24225| Best HMM Match : TF_Otx (HMM E-Value=7.2) 28 8.4
SB_13333| Best HMM Match : Herpes_capsid (HMM E-Value=1.3) 28 8.4
SB_37413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_19616| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 536 PTSAESD-TPNNTNVAKLPTSAPRTNAIPTSVAYSHTQRPEIFCP 667
PTSA S TP++T T A T ++P SVA + +R +I P
Sbjct: 472 PTSASSSITPSSTPATGTATIATATYSVPPSVAPTAKKRQDIASP 516
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 501 TAHITGVQESPFRLQLNPTPQTT---PMLPNFQHPPHEQMQYRPQLPIHIHNDLRSFVPP 671
T H T + +P + PTP+ T P P+++HP + + L HI L +P
Sbjct: 183 TPH-TSIPPTP-HTSIPPTPRPTYKHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPN 240
Query: 672 T 674
T
Sbjct: 241 T 241
>SB_17590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 512 HRSTRESLPTSAESDTP---NNTNVAKLPTSA-PRTNAIPTSVAYSHTQRPEIF 661
HRSTR LP + ESD P T V + T A T +P S T+R +F
Sbjct: 385 HRSTRSQLPKARESDIPLVVTLTVVPPVDTEALGMTLGVPLKQKLSATERALLF 438
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 530 SLPTSAESDTPNNTNVAKLPTSAPRTNAIP-TSVAYSHTQRPE 655
++ +AE+ T VA T+AP T A+P T++A T PE
Sbjct: 736 AITMAAETTAAPETTVAPETTAAPETTAVPETTMASETTMAPE 778
>SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35)
Length = 1208
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 470 QRTICRCGSFNSPYHRSTRESLPTSAESDTPNNTNVAKLPTSAPRT 607
+R + + S RS R +L +S+ESD +N + P +P+T
Sbjct: 47 KRNLVKTPKTESQIRRSKRSNLKSSSESDNEDNYSNNSSPKPSPKT 92
>SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +2
Query: 527 ESLPTSAESDTPNNTNV-----AKLPTSAPRTNAIPTSV 628
+SL T+A +DT NN AK S P AIPTS+
Sbjct: 354 KSLSTAATNDTTNNVTTIKEIKAKTSASPPVVTAIPTSI 392
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 527 ESLPTSAESDTPNNTNVAKLPTSAPRTNAIP-TSVAYSHTQRPE 655
E+ P + E+ P +T+ + T AP T A+P T+ A+ T PE
Sbjct: 1230 ETTP-ALETTAPESTSASTESTVAPETTAVPETTAAHETTVAPE 1272
>SB_17067| Best HMM Match : TP2 (HMM E-Value=4.1)
Length = 330
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 288 ICNSYEVRICFGFFITVKSQLSP*IFAFFKIY 193
IC + C GF + ++ Q P +FA F +Y
Sbjct: 28 ICRNTRKDYCEGFHLLIRLQKPPFVFALFTVY 59
>SB_57269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +3
Query: 417 QYYADEQYPFLNKFDCT-CREQYAG----VGASTAHITGVQESPFRLQLNPTPQTTPMLP 581
Q Y D +Y + K D T C YAG +G +++ + +PF ++ P P+L
Sbjct: 30 QPYCDTKY-YYQKIDRTGCDSTYAGTYVCIGTCQSYVIPYESAPFFRKVAKLPNARPVLI 88
Query: 582 NFQHP 596
+ + P
Sbjct: 89 SIRAP 93
>SB_47113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 352 EPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPIS 513
EP + EK + Q SNP+ +++ S+ + + +++PV L P+S
Sbjct: 617 EPDEEELEKRRVARQAERESNPHYLRLGETTPSSKKSEISVDDIPVANLDLPVS 670
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 548 ESDTPNNTNVAKLPTSAPRTNAIPTSVAYSHTQRP 652
E + P N AK TSA T A+P++ A + ++ P
Sbjct: 267 EEEKPATQNEAKQDTSATNTQAVPSASAVNTSEIP 301
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 498 STAHITGVQESPFRLQLNPTPQTTPMLPN 584
ST T ++ SP + P+P TTP+ P+
Sbjct: 1290 STTSTTPIKPSPSTTPIKPSPSTTPIKPS 1318
>SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08)
Length = 910
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 470 QRTICRCGSF-NSPYHRSTRESLPTSAESDTPNNTN 574
Q + C+ +F +SPY+ +S+ TS E D P++ N
Sbjct: 350 QESACQDYNFESSPYNEHAGDSIQTSEEIDVPSDQN 385
>SB_24225| Best HMM Match : TF_Otx (HMM E-Value=7.2)
Length = 205
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 510 ITGVQESPFRLQLNPTPQTTPMLPNFQHPPHEQMQYRPQL-PIHIHNDLRSFVPPTLGS 683
++ +Q +P + P T + N Q P++Q QY+P L PI S P T G+
Sbjct: 70 LSPIQTAPISTSIKP--HTNGAIINQQQAPYKQSQYQPALSPIQTAPISTSIKPHTDGA 126
>SB_13333| Best HMM Match : Herpes_capsid (HMM E-Value=1.3)
Length = 391
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 555 TPQTTPMLPNFQHPPHEQMQYRPQLPI 635
+P P+L + PHE++ Y P +P+
Sbjct: 100 SPHARPLLSRTRGSPHEKVVYGPDIPV 126
>SB_37413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 503 SPYHRSTRESLPTSAESDTPNNTNVAKLPTSAPRTNAIPTSVAYSHTQRPEIFCPAHTWE 682
+P HR T T+ TP+N+ + +PT T +IP+S+ P + P + +
Sbjct: 8 TPTHRPTTSHNITTPHPTTPSNSTNSTMPT----TQSIPSSLPPKTMPAPTVKHPTKSTQ 63
Query: 683 F 685
+
Sbjct: 64 Y 64
>SB_19616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +1
Query: 316 VPAPAGNKMPIWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWE 495
+P +G P+WE P + TH++ A N ++ PF T WE
Sbjct: 17 LPGASGWWNPLWELNYPVPQDTHLE---WAGENGELLMKREAPFETLHDEDGSGLDRFWE 73
Query: 496 LQQ 504
+ Q
Sbjct: 74 INQ 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,833,855
Number of Sequences: 59808
Number of extensions: 493834
Number of successful extensions: 2112
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2096
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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