Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0556.Seq
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024763-6|AAO12403.1|  603|Caenorhabditis elegans Calpain famil...    29   2.4  
Z35595-9|CAA84638.1|  367|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF295927-1|AAL83724.1|  377|Caenorhabditis elegans paraoxonase-l...    29   3.2  
AF003141-2|AAK21482.2|  377|Caenorhabditis elegans Mechanosensor...    29   3.2  
U23448-8|AAL27226.1|  849|Caenorhabditis elegans Dnaj domain (pr...    28   7.4  
U23448-7|AAM81128.1|  868|Caenorhabditis elegans Dnaj domain (pr...    28   7.4  
U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical...    27   9.8  

>AC024763-6|AAO12403.1|  603|Caenorhabditis elegans Calpain family
           protein 4, isoform b protein.
          Length = 603

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 379 LEVGQPTSKSSWRFQVQPRLTTNSPSMYFFSFLHT 275
           +E G+ +SK SWR Q QP      PS+    FLH+
Sbjct: 566 MEDGEWSSKHSWRLQQQPIYLPQEPSI--LHFLHS 598


>Z35595-9|CAA84638.1|  367|Caenorhabditis elegans Hypothetical
           protein C01G6.9 protein.
          Length = 367

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +2

Query: 176 LISVSTPGILICSASKTATRMLELPFLFDSFEVCMQERKEI 298
           +I +      +C     ++R LEL F+ DS+  C+ E+ ++
Sbjct: 1   MIILKIAAFFLCLKFGVSSRPLELQFVCDSYHECLDEKSQL 41


>AF295927-1|AAL83724.1|  377|Caenorhabditis elegans paraoxonase-like
           protein MEC-6 protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 309 HHQCISFLSCIQTSKLSNRK 250
           +HQCI F   +++SKL++RK
Sbjct: 148 NHQCIHFFQIVESSKLNHRK 167


>AF003141-2|AAK21482.2|  377|Caenorhabditis elegans Mechanosensory
           abnormality protein6 protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 309 HHQCISFLSCIQTSKLSNRK 250
           +HQCI F   +++SKL++RK
Sbjct: 148 NHQCIHFFQIVESSKLNHRK 167


>U23448-8|AAL27226.1|  849|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform b
           protein.
          Length = 849

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 237 CWSYLSYLTASKSVCKKEKKYIDGELVVSRGCTWKRQ 347
           C   + Y   S + CKK KK    EL+ + GC W ++
Sbjct: 805 CTDNVVYDITSWATCKKNKK---AELISNDGCRWTKE 838


>U23448-7|AAM81128.1|  868|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform d
           protein.
          Length = 868

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 237 CWSYLSYLTASKSVCKKEKKYIDGELVVSRGCTWKRQ 347
           C   + Y   S + CKK KK    EL+ + GC W ++
Sbjct: 805 CTDNVVYDITSWATCKKNKK---AELISNDGCRWTKE 838


>U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical
           protein F53B1.2 protein.
          Length = 483

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 155 IRCATILLISVSTPGI-LICSASKTATRMLEL 247
           +RC T+L+ S+S PGI L C A    T   +L
Sbjct: 271 LRCFTMLITSLSVPGIHLQCEARPNTTMQEKL 302


>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
           protein Y75B8A.26 protein.
          Length = 1144

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 161 CATILLISVSTPGILICSA 217
           C  ++LIS+STP  L+C+A
Sbjct: 710 CMILVLISISTPIFLVCAA 728


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,282,526
Number of Sequences: 27780
Number of extensions: 272809
Number of successful extensions: 719
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)