Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0555.Seq
         (420 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   0.80 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   4.3  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    20   9.9  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.8 bits (49), Expect = 0.80
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 90  PGCYARKELSSLEHEGIDTNP 28
           PG + R++  + +H+G+ T+P
Sbjct: 219 PGMHPRQQQQAQQHQGVVTSP 239


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 75  RKELSSLEHEGIDTNPAQAEA 13
           R +L   ++EGI + P+QA +
Sbjct: 305 RNDLDLEKYEGISSTPSQASS 325


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 5   FSAASACAGFVSIPSCSRLDSS 70
           ++A S      S+P+ SRLD S
Sbjct: 85  YAANSQPPRITSVPNTSRLDKS 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,890
Number of Sequences: 438
Number of extensions: 1179
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)