Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0554.Seq
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   7.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   7.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.0  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 179 IFIFVTYHRAAW 144
           I IFVT HR AW
Sbjct: 18  ILIFVTSHRPAW 29


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 202 CLGQLSSEMAYKTASFFKRFDSLPV 276
           CL     E+A+    + KRF  LPV
Sbjct: 243 CLAHNGGEIAWTKVIYVKRFFGLPV 267


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 202 CLGQLSSEMAYKTASFFKRFDSLPV 276
           CL     E+A+    + KRF  LPV
Sbjct: 243 CLAHNGGEIAWTKVIYVKRFFGLPV 267


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 202 CLGQLSSEMAYKTASFFKRFDSLPV 276
           CL     E+A+    + KRF  LPV
Sbjct: 243 CLAHNGGEIAWTKVIYVKRFFGLPV 267


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -3

Query: 734 DQTNFLLDFVNAQTVPQGQPGPWRELIDWVRIRVR 630
           D+T   L  V A   P  +   W E ++W  I  +
Sbjct: 81  DRTKMSLQLVLAALYPPNKLQQWNEDLNWQPIATK 115


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -3

Query: 734 DQTNFLLDFVNAQTVPQGQPGPWRELIDWVRIRVR 630
           D+T   L  V A   P  +   W E ++W  I  +
Sbjct: 96  DRTKMSLQLVLAALYPPNKLQQWNEDLNWQPIATK 130


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = -3

Query: 668 WRELIDWVRIRVR*CKAGRLTAATCSPTIVLQAVTLDAVAAV 543
           W+ L     + V  CK  R+      P + L+ +T+    +V
Sbjct: 88  WQRLTSLHELHVHGCKVLRIPEGAFQPLLELKKLTVQTFNSV 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,587
Number of Sequences: 438
Number of extensions: 3911
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)