Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0552.Seq
         (698 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457139-1|CAG33420.1|  333|Homo sapiens SUCLG1 protein.              115   1e-25
BC000504-1|AAH00504.1|  333|Homo sapiens SUCLG1 protein protein.      115   1e-25
AC096770-1|AAY24107.1|  333|Homo sapiens unknown protein.             115   1e-25
AF104921-1|AAD17940.2|  333|Homo sapiens succinyl-CoA synthetase...   114   3e-25
Z68204-1|CAA92426.1|  132|Homo sapiens succinyl coenzyme A synth...    85   2e-16

>CR457139-1|CAG33420.1|  333|Homo sapiens SUCLG1 protein.
          Length = 333

 Score =  115 bits (277), Expect = 1e-25
 Identities = 60/109 (55%), Positives = 66/109 (60%)
 Frame = +2

Query: 179 K*NKSDCSGFHWKAGYLPQPTSP*LCTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 358
           K  K  C GF  K G      +    TK+VGG +P K G  HLG PVF TVKEAK  TGA
Sbjct: 41  KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGA 100

Query: 359 TASVIYVPPPGXXXXXXXXXXXXMPLIVCXTEGVPQHDMVRVKHALLRQ 505
           TASVIYVPPP             +PL+VC TEG+PQ DMVRVKH LLRQ
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149



 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 40/60 (66%), Positives = 49/60 (81%)
 Frame = +1

Query: 496 LETKQSRLVGPNCPGIIAPEKCKIGXMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLG 675
           L  +++RL+GPNCPG+I P +CKIG MP  +HK+G IG+VSRSGTLTYEA HQTT  GLG
Sbjct: 147 LRQEKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLG 206



 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +3

Query: 147 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYVLKLL 269
           Y  +R++L +   TK+I QGFTGKQGTFHSQQAL+Y  KL+
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLV 70


>BC000504-1|AAH00504.1|  333|Homo sapiens SUCLG1 protein protein.
          Length = 333

 Score =  115 bits (277), Expect = 1e-25
 Identities = 60/109 (55%), Positives = 66/109 (60%)
 Frame = +2

Query: 179 K*NKSDCSGFHWKAGYLPQPTSP*LCTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 358
           K  K  C GF  K G      +    TK+VGG +P K G  HLG PVF TVKEAK  TGA
Sbjct: 41  KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGA 100

Query: 359 TASVIYVPPPGXXXXXXXXXXXXMPLIVCXTEGVPQHDMVRVKHALLRQ 505
           TASVIYVPPP             +PL+VC TEG+PQ DMVRVKH LLRQ
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149



 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 40/60 (66%), Positives = 49/60 (81%)
 Frame = +1

Query: 496 LETKQSRLVGPNCPGIIAPEKCKIGXMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLG 675
           L  +++RL+GPNCPG+I P +CKIG MP  +HK+G IG+VSRSGTLTYEA HQTT  GLG
Sbjct: 147 LRQEKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLG 206



 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +3

Query: 147 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYVLKLL 269
           Y  +R++L +   TK+I QGFTGKQGTFHSQQAL+Y  KL+
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLV 70


>AC096770-1|AAY24107.1|  333|Homo sapiens unknown protein.
          Length = 333

 Score =  115 bits (277), Expect = 1e-25
 Identities = 60/109 (55%), Positives = 66/109 (60%)
 Frame = +2

Query: 179 K*NKSDCSGFHWKAGYLPQPTSP*LCTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 358
           K  K  C GF  K G      +    TK+VGG +P K G  HLG PVF TVKEAK  TGA
Sbjct: 41  KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGA 100

Query: 359 TASVIYVPPPGXXXXXXXXXXXXMPLIVCXTEGVPQHDMVRVKHALLRQ 505
           TASVIYVPPP             +PL+VC TEG+PQ DMVRVKH LLRQ
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149



 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 40/60 (66%), Positives = 49/60 (81%)
 Frame = +1

Query: 496 LETKQSRLVGPNCPGIIAPEKCKIGXMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLG 675
           L  +++RL+GPNCPG+I P +CKIG MP  +HK+G IG+VSRSGTLTYEA HQTT  GLG
Sbjct: 147 LRQEKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLG 206



 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +3

Query: 147 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYVLKLL 269
           Y  +R++L +   TK+I QGFTGKQGTFHSQQAL+Y  KL+
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLV 70


>AF104921-1|AAD17940.2|  333|Homo sapiens succinyl-CoA synthetase
           alpha subunit protein.
          Length = 333

 Score =  114 bits (274), Expect = 3e-25
 Identities = 60/109 (55%), Positives = 65/109 (59%)
 Frame = +2

Query: 179 K*NKSDCSGFHWKAGYLPQPTSP*LCTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 358
           K  K  C GF  K G      +    TK+VGG  P K G  HLG PVF TVKEAK  TGA
Sbjct: 41  KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTLPGKGGQTHLGLPVFNTVKEAKEQTGA 100

Query: 359 TASVIYVPPPGXXXXXXXXXXXXMPLIVCXTEGVPQHDMVRVKHALLRQ 505
           TASVIYVPPP             +PL+VC TEG+PQ DMVRVKH LLRQ
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149



 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 40/60 (66%), Positives = 49/60 (81%)
 Frame = +1

Query: 496 LETKQSRLVGPNCPGIIAPEKCKIGXMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLG 675
           L  +++RL+GPNCPG+I P +CKIG MP  +HK+G IG+VSRSGTLTYEA HQTT  GLG
Sbjct: 147 LRQEKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLG 206



 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +3

Query: 147 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYVLKLL 269
           Y  +R++L +   TK+I QGFTGKQGTFHSQQAL+Y  KL+
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLV 70


>Z68204-1|CAA92426.1|  132|Homo sapiens succinyl coenzyme A
           synthetase protein.
          Length = 132

 Score = 85.4 bits (202), Expect = 2e-16
 Identities = 46/92 (50%), Positives = 51/92 (55%)
 Frame = +2

Query: 179 K*NKSDCSGFHWKAGYLPQPTSP*LCTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGA 358
           K  K  C GF  K G      +    TK+VGG +P K G  HLG PVF TVKEAK  TGA
Sbjct: 41  KNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGA 100

Query: 359 TASVIYVPPPGXXXXXXXXXXXXMPLIVCXTE 454
           TASVIYVPPP             +PL+VC TE
Sbjct: 101 TASVIYVPPPFAAAAINEAIEAEIPLVVCITE 132



 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +3

Query: 147 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYVLKLL 269
           Y  +R++L +   TK+I QGFTGKQGTFHSQQAL+Y  KL+
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLV 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,737,937
Number of Sequences: 237096
Number of extensions: 2342266
Number of successful extensions: 4794
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4788
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)