Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0552.Seq
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70203-4|CAA94107.1|  322|Caenorhabditis elegans Hypothetical pr...   104   7e-23
AF003389-2|AAC71132.1|  321|Caenorhabditis elegans Hypothetical ...   100   2e-21
U37429-10|AAN63413.2|  100|Caenorhabditis elegans Hypothetical p...    29   3.2  
U00051-14|AAM29692.1|  469|Caenorhabditis elegans Hypothetical p...    28   7.4  
U00051-13|AAA91358.1|  491|Caenorhabditis elegans Hypothetical p...    28   7.4  

>Z70203-4|CAA94107.1|  322|Caenorhabditis elegans Hypothetical
           protein C05G5.4 protein.
          Length = 322

 Score =  104 bits (249), Expect = 7e-23
 Identities = 51/84 (60%), Positives = 57/84 (67%)
 Frame = +2

Query: 257 TKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPL 436
           TKVVGGV+  KAGTEHLG PVF  V EA+  TGA ASVIYVP               +PL
Sbjct: 58  TKVVGGVNANKAGTEHLGLPVFKNVSEARNKTGADASVIYVPASAAGSAIEEAMDAEIPL 117

Query: 437 IVCXTEGVPQHDMVRVKHALLRQN 508
           +VC TEG+PQHDMVRVK  LL+QN
Sbjct: 118 VVCITEGIPQHDMVRVKSRLLKQN 141



 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 42/60 (70%), Positives = 50/60 (83%)
 Frame = +1

Query: 496 LETKQSRLVGPNCPGIIAPEKCKIGXMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLG 675
           L+  ++RLVGPNCPGII+ ++CKIG MP  +HKRGCIG+VSRSGTLTYEA HQTT  G G
Sbjct: 138 LKQNKTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAVHQTTQVGFG 197



 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +3

Query: 147 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYVLKLL 269
           Y  T  NL +  +TKVIVQGFTGKQGTFH +Q L+Y  K++
Sbjct: 21  YNSTYNNLKINKDTKVIVQGFTGKQGTFHGKQMLEYNTKVV 61


>AF003389-2|AAC71132.1|  321|Caenorhabditis elegans Hypothetical
           protein F23H11.3 protein.
          Length = 321

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 43/60 (71%), Positives = 49/60 (81%)
 Frame = +1

Query: 496 LETKQSRLVGPNCPGIIAPEKCKIGXMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLG 675
           L+  +SRL+GPNCPGIIA   CKIG MP  +HK+GCIG+VSRSGTLTYEA HQTT  GLG
Sbjct: 139 LKQNKSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTTVGLG 198



 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 49/84 (58%), Positives = 56/84 (66%)
 Frame = +2

Query: 257 TKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPL 436
           T +VGGVSP KAG  HLG PVFG+V EAK  TGA A+VIYVP  G            + L
Sbjct: 59  TNLVGGVSPNKAGQTHLGLPVFGSVAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGL 118

Query: 437 IVCXTEGVPQHDMVRVKHALLRQN 508
           IV  TEG+PQ DMVRVK+ LL+QN
Sbjct: 119 IVAITEGIPQQDMVRVKNRLLKQN 142



 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +3

Query: 147 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYVLKLL 269
           Y +TR NL++   TKVIVQGFTG+QGTFHS+Q L+Y   L+
Sbjct: 22  YNDTRNNLMINKSTKVIVQGFTGRQGTFHSKQMLEYNTNLV 62


>U37429-10|AAN63413.2|  100|Caenorhabditis elegans Hypothetical
           protein F09E5.16 protein.
          Length = 100

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -2

Query: 394 SSRGRYINNRGSCSCACLCLFD-CTKHRLTK 305
           SSRG  +  R + S AC CL   CT H +TK
Sbjct: 70  SSRGSVMRRRSAGSYACPCLHKVCTYHCMTK 100


>U00051-14|AAM29692.1|  469|Caenorhabditis elegans Hypothetical
           protein F42G9.1b protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 174 LTSETKVIVQGFTGKQGTFHSQQALDYVLKLLEECHQRRLVQNILVSLCLVQS 332
           LT E + IV    G   +  SQQ +D+V  LL +      V + L   CL  S
Sbjct: 394 LTPEDEFIVVACDGIWNSMESQQVVDFVRDLLAKGSSCAEVCDALCDACLADS 446


>U00051-13|AAA91358.1|  491|Caenorhabditis elegans Hypothetical
           protein F42G9.1a protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 174 LTSETKVIVQGFTGKQGTFHSQQALDYVLKLLEECHQRRLVQNILVSLCLVQS 332
           LT E + IV    G   +  SQQ +D+V  LL +      V + L   CL  S
Sbjct: 416 LTPEDEFIVVACDGIWNSMESQQVVDFVRDLLAKGSSCAEVCDALCDACLADS 468


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,368,729
Number of Sequences: 27780
Number of extensions: 357811
Number of successful extensions: 881
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)