Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0551.Seq
         (826 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    29   0.045
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.0  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 29.1 bits (62), Expect = 0.045
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 629 LRTIIYQVLQGLAHMHRHGFFHRV*NRKICLCCGPGLVKIADLGSAREV 775
           L +I  QV  G+ H+ +    HR    +  L C    VK++D G +R+V
Sbjct: 594 LLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDV 642


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/36 (25%), Positives = 15/36 (41%)
 Frame = +2

Query: 653 LQGLAHMHRHGFFHRV*NRKICLCCGPGLVKIADLG 760
           +  + H H H   H +    + +  GP L  +A  G
Sbjct: 356 ISSMGHSHAHPMHHDMLPETMHMGMGPSLTPLASPG 391


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/36 (25%), Positives = 15/36 (41%)
 Frame = +2

Query: 653 LQGLAHMHRHGFFHRV*NRKICLCCGPGLVKIADLG 760
           +  + H H H   H +    + +  GP L  +A  G
Sbjct: 356 ISSMGHSHAHPMHHDMLPETMHMGMGPSLTPLASPG 391


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 345 LQQLGDGTYGSVVLAQ 392
           LQ++ DG YGSVV+ Q
Sbjct: 249 LQKM-DGLYGSVVIRQ 263


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 345 LQQLGDGTYGSVVLAQ 392
           LQ++ DG YGSVV+ Q
Sbjct: 249 LQKM-DGLYGSVVIRQ 263


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 625 RFWECTIGIP 596
           RFWEC   IP
Sbjct: 25  RFWECLAPIP 34


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 577 KSVPADTGCRSCIPRTGAENHHIP 648
           + +P D   R   PR G+   H P
Sbjct: 189 RPLPLDQKARDLSPRNGSPTDHSP 212


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 625 RFWECTIGIP 596
           RFWEC   IP
Sbjct: 25  RFWECLAPIP 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,992
Number of Sequences: 336
Number of extensions: 4240
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)