Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0551.Seq
         (826 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    47   2e-07
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    34   0.002
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    29   0.039
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    25   0.64 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.85 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.85 
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    22   7.9  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    22   7.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   7.9  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 47.2 bits (107), Expect = 2e-07
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
 Frame = +2

Query: 482 IA*KTQPRQIVKLREVIRENDTLYFVFEYMR-GNLYQLIRDADRAFPEPVLRTIIYQVLQ 658
           +A  T+P  +V+L    +  D LYFV EY+  G+L   I+   + F EPV      ++  
Sbjct: 38  LALSTKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQCGK-FKEPVAVFYASEIAI 96

Query: 659 GLAHMHRHGFFHRV*NRKICLCCGPGLVKIADLGSARE 772
           GL  +H  G  +R       L    G +KIAD G  +E
Sbjct: 97  GLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMCKE 134


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = +2

Query: 509 IVKLREVIRENDTLYFVFEY-MRGNLYQLIRDADRAFPEPVLRTIIYQVLQGLAHMHRHG 685
           +VKL +  ++   LY + E  + G L+ ++RD    F +   R     V++   ++H   
Sbjct: 428 VVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGH-FDDGTTRFYTACVVEAFDYLHSRN 486

Query: 686 FFHRV*NRKICLCCGPGLVKIADLGSAREV 775
             +R    +  L    G VK+ D G A+ +
Sbjct: 487 IIYRDLKPENLLLDSQGYVKLVDFGFAKRL 516


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 29.5 bits (63), Expect = 0.039
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 641 IYQVLQGLAHMHRHGFFHRV*NRKICLCCGP---GLVKIADLGSAREVPVEA 787
           I Q+L+ + H H +G  HR    +  L         VK+AD G A EV  EA
Sbjct: 15  IQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEA 66


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 622 TGAENHHIPGSARASTYASTRLLSPRLKPENLPVLR 729
           T AENH    +    +Y    ++SPRLK   +  LR
Sbjct: 539 TRAENHQTGTAKMGPSYDPMAVVSPRLKVHGIRGLR 574


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 638 IIYQVLQGLAHMHRHGFFHRV*NRKICLCCGPGLVKIADLG 760
           I   VL+G+ ++H  G  HR    K  L       K+ D G
Sbjct: 702 IALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFG 742


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 638 IIYQVLQGLAHMHRHGFFHRV*NRKICLCCGPGLVKIADLG 760
           I   VL+G+ ++H  G  HR    K  L       K+ D G
Sbjct: 740 IALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFG 780


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 100 HHFQNTFKLIQTTYVK 53
           +H QN FK+I++T  K
Sbjct: 57  NHIQNIFKIIKSTNEK 72


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 100 HHFQNTFKLIQTTYVK 53
           +H QN FK+I++T  K
Sbjct: 40  NHIQNIFKIIKSTNEK 55


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -3

Query: 233 DLN*SETLNKHLVAYFQYPLINNVTNLCLRRNYLEIVKDYLSLQAS 96
           D+N  ET+ + L  Y+Q  ++  V    L   ++++ KD + +  +
Sbjct: 508 DMN-YETMGRALRYYYQRGILAKVDGQRLVYQFVDVPKDIIEIDCT 552


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,737
Number of Sequences: 438
Number of extensions: 5017
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)