Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0547.Seq
         (824 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   3.7  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   4.9  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    24   6.5  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 624 SLRRPCWNRSRRSAELFVIFDMDGLS 701
           +L+  C N+S  + +LF IF  DG S
Sbjct: 24  ALKSDCVNQSSEAVKLFPIFIFDGES 49


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 712 VMQFTPPFAKRIVDW 756
           ++ FTPP  KR++ W
Sbjct: 1   MLPFTPPIVKRLLGW 15


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -1

Query: 776 ERYAFCNQS-TILLAKGGVNCMTCCMGETVHVKDDEQLRRSATPVPTW 636
           +RY   N +  ILLA+G +  + C MG +  V  +    +    +  W
Sbjct: 326 DRYRLANGNHIILLAEGRLVNLGCAMGHSSFVMSNSFTNQVLAQIELW 373


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 845,416
Number of Sequences: 2352
Number of extensions: 16325
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)