Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0547.Seq
(824 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding pro... 37 0.10
J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein. 37 0.10
BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding p... 37 0.10
BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding p... 36 0.24
BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding p... 36 0.24
AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetic... 36 0.24
BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open read... 31 6.7
BC075045-1|AAH75045.1| 534|Homo sapiens PSD3 protein protein. 31 6.7
BC075044-1|AAH75044.1| 533|Homo sapiens PSD3 protein protein. 31 6.7
AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein. 31 6.7
AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens ... 31 6.7
AF519767-1|AAM74203.1| 534|Homo sapiens ADP-ribosylation factor... 31 6.7
AF243495-1|AAF61269.2| 534|Homo sapiens hepatocellular carcinom... 31 6.7
AB023159-1|BAA76786.2| 537|Homo sapiens KIAA0942 protein protein. 31 6.7
>L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding
protein protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.10
Identities = 29/154 (18%), Positives = 63/154 (40%), Gaps = 1/154 (0%)
Frame = +3
Query: 348 NEAWLIRFLRPCKFYPESAYDLIKRYYGFKVKHHKHYDGLTPSKETNVFNENVLRCCRPE 527
+ + +RF+R KF AY+L++ Y F++++ + +D L+P
Sbjct: 92 DSGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSR 151
Query: 528 ISAGGGCSSWNLERNGSIINVRWTRFSKAACCSLRRPCWNRSRRSAELFVIFDMDGLSHA 707
G +N+E N + + +A C L + N + +I + G +
Sbjct: 152 DKYGRVVMLFNIE-NWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQ 210
Query: 708 ASHAVHATFC*ENRRLVAECIPLRIKGVYII-QP 806
+ ++ + + ++ + P R K ++ I QP
Sbjct: 211 QAASLRTSDLRKMVDMLQDSFPARFKAIHFIHQP 244
>J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.10
Identities = 29/154 (18%), Positives = 63/154 (40%), Gaps = 1/154 (0%)
Frame = +3
Query: 348 NEAWLIRFLRPCKFYPESAYDLIKRYYGFKVKHHKHYDGLTPSKETNVFNENVLRCCRPE 527
+ + +RF+R KF AY+L++ Y F++++ + +D L+P
Sbjct: 92 DSGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSR 151
Query: 528 ISAGGGCSSWNLERNGSIINVRWTRFSKAACCSLRRPCWNRSRRSAELFVIFDMDGLSHA 707
G +N+E N + + +A C L + N + +I + G +
Sbjct: 152 DKYGRVVMLFNIE-NWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQ 210
Query: 708 ASHAVHATFC*ENRRLVAECIPLRIKGVYII-QP 806
+ ++ + + ++ + P R K ++ I QP
Sbjct: 211 QAASLRTSDLRKMVDMLQDSFPARFKAIHFIHQP 244
>BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding
protein 1 protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.10
Identities = 29/154 (18%), Positives = 63/154 (40%), Gaps = 1/154 (0%)
Frame = +3
Query: 348 NEAWLIRFLRPCKFYPESAYDLIKRYYGFKVKHHKHYDGLTPSKETNVFNENVLRCCRPE 527
+ + +RF+R KF AY+L++ Y F++++ + +D L+P
Sbjct: 92 DSGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSR 151
Query: 528 ISAGGGCSSWNLERNGSIINVRWTRFSKAACCSLRRPCWNRSRRSAELFVIFDMDGLSHA 707
G +N+E N + + +A C L + N + +I + G +
Sbjct: 152 DKYGRVVMLFNIE-NWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQ 210
Query: 708 ASHAVHATFC*ENRRLVAECIPLRIKGVYII-QP 806
+ ++ + + ++ + P R K ++ I QP
Sbjct: 211 QAASLRTSDLRKMVDMLQDSFPARFKAIHFIHQP 244
>BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 35.5 bits (78), Expect = 0.24
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 515 LPTRDQCGRRVLVLELGKKWKHNKCSLDEVFKGCVLFLEAAMLEPESQICGAV 673
L D GR++LVL W ++ +L ++ + +L LEA + +PE Q+ G V
Sbjct: 108 LANLDHYGRKILVL-FAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFV 159
>BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 35.5 bits (78), Expect = 0.24
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 515 LPTRDQCGRRVLVLELGKKWKHNKCSLDEVFKGCVLFLEAAMLEPESQICGAV 673
L D GR++LVL W ++ +L ++ + +L LEA + +PE Q+ G V
Sbjct: 108 LANLDHYGRKILVL-FAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFV 159
>AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 327
Score = 35.5 bits (78), Expect = 0.24
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 515 LPTRDQCGRRVLVLELGKKWKHNKCSLDEVFKGCVLFLEAAMLEPESQICGAV 673
L D GR++LVL W ++ +L ++ + +L LEA + +PE Q+ G V
Sbjct: 108 LANLDHYGRKILVL-FAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFV 159
>BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open reading
frame 95 protein.
Length = 257
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 731 GGVNCMTCCMGETVHVKDDEQLRRSATPVPTWPP 630
GG CM C G + + + RRS +P PTWPP
Sbjct: 43 GGRPCM-CTAGRRPN-RASGRRRRSCSPAPTWPP 74
>BC075045-1|AAH75045.1| 534|Homo sapiens PSD3 protein protein.
Length = 534
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 782 YAERYAFCNQSTILLAKGGVNCMTCCM 702
++ RY +CN TI ++ GV+C+TC +
Sbjct: 145 FSNRYFYCNPDTI-ASQDGVHCLTCAI 170
>BC075044-1|AAH75044.1| 533|Homo sapiens PSD3 protein protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 782 YAERYAFCNQSTILLAKGGVNCMTCCM 702
++ RY +CN TI ++ GV+C+TC +
Sbjct: 145 FSNRYFYCNPDTI-ASQDGVHCLTCAI 170
>AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein.
Length = 257
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 731 GGVNCMTCCMGETVHVKDDEQLRRSATPVPTWPP 630
GG CM C G + + + RRS +P PTWPP
Sbjct: 43 GGRPCM-CTAGRRPN-RASGRRRRSCSPAPTWPP 74
>AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens
cDNA FLJ14280 fis, clone PLACE1005584, weakly similar to
TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP0. ).
Length = 257
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 731 GGVNCMTCCMGETVHVKDDEQLRRSATPVPTWPP 630
GG CM C G + + + RRS +P PTWPP
Sbjct: 43 GGRPCM-CTAGRRPN-RASGRRRRSCSPAPTWPP 74
>AF519767-1|AAM74203.1| 534|Homo sapiens ADP-ribosylation factor
guanine nucleotide factor 6 protein.
Length = 534
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 782 YAERYAFCNQSTILLAKGGVNCMTCCM 702
++ RY +CN TI ++ GV+C+TC +
Sbjct: 145 FSNRYFYCNPDTI-ASQDGVHCLTCAI 170
>AF243495-1|AAF61269.2| 534|Homo sapiens hepatocellular
carcinoma-associated antigen 67 protein.
Length = 534
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 782 YAERYAFCNQSTILLAKGGVNCMTCCM 702
++ RY +CN TI ++ GV+C+TC +
Sbjct: 145 FSNRYFYCNPDTI-ASQDGVHCLTCAI 170
>AB023159-1|BAA76786.2| 537|Homo sapiens KIAA0942 protein protein.
Length = 537
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 782 YAERYAFCNQSTILLAKGGVNCMTCCM 702
++ RY +CN TI ++ GV+C+TC +
Sbjct: 149 FSNRYFYCNPDTI-ASQDGVHCLTCAI 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,631,518
Number of Sequences: 237096
Number of extensions: 2526458
Number of successful extensions: 5322
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5318
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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