Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0547.Seq
         (824 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53181-7|AAA93487.1|  472|Caenorhabditis elegans Hypothetical pr...    31   0.76 
U13875-9|AAA21160.3|  403|Caenorhabditis elegans Hypothetical pr...    28   7.1  

>U53181-7|AAA93487.1|  472|Caenorhabditis elegans Hypothetical
           protein F36D4.4 protein.
          Length = 472

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 591 RWTRFSKAACCSLRRPCWNRSRRSAEL 671
           R T F + ACC+ RRP WNR++  +++
Sbjct: 335 RMTEFRRLACCNPRRP-WNRTKSFSQM 360


>U13875-9|AAA21160.3|  403|Caenorhabditis elegans Hypothetical
           protein C26E6.6 protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -1

Query: 704 MGETVHVKD--DEQLRRSATPVPTWPP 630
           +GET+ +KD   E+ R  + P+PTW P
Sbjct: 312 IGETILLKDCLQEEKRLKSGPMPTWAP 338


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,606,849
Number of Sequences: 27780
Number of extensions: 390156
Number of successful extensions: 1026
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)