Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0545.Seq
         (704 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8TUM2 Cluster: Predicted protein; n=1; Methanosarcina ...    34   3.0  
UniRef50_A5JZC7 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_Q8TUM2 Cluster: Predicted protein; n=1; Methanosarcina
           acetivorans|Rep: Predicted protein - Methanosarcina
           acetivorans
          Length = 74

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = -3

Query: 225 DKMKMAEKRSLARAQTCNQS*FFFQLIFDVCLCFLLYFFSCNPYCVIGYFRSFIEC 58
           +K K  EKR +    + + S  F+   F + + +LL+F SC+ + V+ +F  FI C
Sbjct: 15  NKEKKTEKRKIVINYSFSFSFSFYPPCFTIFVLYLLFFISCSSFPVL-HFLFFISC 69


>UniRef50_A5JZC7 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3304

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -1

Query: 173  INPSFFFNSFLMCVYVFFCTSFLVIHIV**VTLDRLLNVFFIKTNYRSASF 21
            IN S FF+ F  CVY  F      ++++    + R L +F IK+  ++ S+
Sbjct: 2528 INSSLFFSEFDSCVYYLFSYKSFCLYVMNSKKVQRNLGIFNIKSVVKNISY 2578


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,881,953
Number of Sequences: 1657284
Number of extensions: 14044128
Number of successful extensions: 34762
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34749
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)