Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0544.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    28   0.25 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    28   0.25 
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   2.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   7.0  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 262 TKCGHVFCATCLKTTLERQSDCPKC 336
           TKC H FC  C     ++ S C  C
Sbjct: 260 TKCKHYFCERCALAQYKKSSRCAIC 284


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 262 TKCGHVFCATCLKTTLERQSDCPKC 336
           TKC H FC  C     ++ S C  C
Sbjct: 260 TKCKHYFCERCALAQYKKSSRCAIC 284


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 551 DILECRES-MEKLNELNEKGRAKITEVREELENLYLYGK 664
           +I +CR   +E   ++N   RAK +E RE+L  LY+  +
Sbjct: 277 EIAQCRSHCIEARRKMN---RAKSSEQREDLRRLYILAR 312


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 514 G*VSFSSQSNYPGYPGMQGVDG 579
           G  S   Q+  PG PG++G DG
Sbjct: 308 GAASEKGQNGEPGVPGLRGNDG 329



 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 538 SNYPGYPGMQGVDG 579
           + +PG PG  GVDG
Sbjct: 169 AGHPGAPGRPGVDG 182


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 544 YPGYPGMQGVDGE 582
           YPG PG +G+ GE
Sbjct: 484 YPGQPGPEGLRGE 496


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,933
Number of Sequences: 2352
Number of extensions: 12369
Number of successful extensions: 59
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)