Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0543.Seq
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    87   3e-16
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    38   0.18 
UniRef50_A7R2X6 Cluster: Chromosome undetermined scaffold_462, w...    33   8.9  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 87.4 bits (207), Expect = 3e-16
 Identities = 43/58 (74%), Positives = 46/58 (79%)
 Frame = +1

Query: 289 FYL*LADPADFVVPQSISKRPKLL*K*T*NKQKGIRPTGDISKEKQNCYFYLIPSIFI 462
           F + LADPADFVVPQSI+KRPK L K    + KGIR TGD SKEKQNCYFYLIP IFI
Sbjct: 18  FMIILADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFYLIPRIFI 75


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -3

Query: 531 LLFVSLAKLENG*TDLTNFGLELYENARN*IKI 433
           L+FVS  KLENG TDL NFGLEL    +  +K+
Sbjct: 14  LVFVSPLKLENGWTDLANFGLELPVEVQRGLKV 46


>UniRef50_A7R2X6 Cluster: Chromosome undetermined scaffold_462,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_462, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 143

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 532 LFFIYIYRLILVFQFIFISNYGFH-IECPSATAYGLQKYRTSQMIPPSSL 678
           +F +Y+Y L L+FQ IF  +Y +H + C       +  YR      P  L
Sbjct: 7   IFSVYVYSLSLLFQNIFSPHYVYHGLICQGPHQRSIPSYRVGPHCSPGML 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,946,230
Number of Sequences: 1657284
Number of extensions: 10287167
Number of successful extensions: 20795
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20780
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)