Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0542.Seq
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0512 + 18455454-18456121,18456214-18456318,18457493-184576... 32 0.41
02_03_0106 + 15292869-15296138 31 0.94
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 30 1.6
08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947 30 1.6
06_01_0159 + 1193479-1194435,1194509-1194652,1194735-1194821,119... 30 1.6
06_01_0158 - 1186903-1187013,1187108-1187197,1187504-1187590,118... 30 1.6
01_01_0089 - 699533-699643,699738-700046,700134-700220,700298-70... 30 1.6
08_02_0849 - 21841470-21841883,21843748-21843813,21844768-218449... 30 2.2
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793... 29 2.9
03_06_0034 + 31197846-31198417,31198562-31198987,31199074-311993... 29 2.9
10_08_0299 - 16607152-16607322,16607465-16607785,16607870-166081... 29 3.8
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 29 3.8
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 29 3.8
02_04_0170 + 20576149-20576889 29 5.0
10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020 28 6.6
06_02_0186 + 12787866-12788055,12788575-12788642,12788864-127890... 28 6.6
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998... 28 6.6
12_02_0247 + 16409988-16411367 28 8.7
02_05_0636 + 30536717-30537022,30538836-30538952,30539026-305394... 28 8.7
>10_08_0512 +
18455454-18456121,18456214-18456318,18457493-18457615,
18457732-18457902,18458076-18458205,18458458-18458670,
18458757-18458866,18459144-18459186
Length = 520
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -2
Query: 232 LWIVCDVILWATLAIQVDMSCVWLTLRQRPVSRQTLRCFLSRTLFKPQASISVDKYKKHT 53
LWIV + +W + + C+W R++P +++ + I+VD+ ++H
Sbjct: 22 LWIVIGISIWVVIFFILGFMCLWSIYRRKP--KKSFDKIPVSQIPDVSKEIAVDEVREHA 79
Query: 52 VV 47
VV
Sbjct: 80 VV 81
>02_03_0106 + 15292869-15296138
Length = 1089
Score = 31.1 bits (67), Expect = 0.94
Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 144 GRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQEDLKE-ATENLDEIRD 299
GR +++++++T + + HR+ ++ W C++ L E ++E L ++D
Sbjct: 308 GRILITTRSEEVATGMKAMVHRVDKMDAENGWALLCRQSLPECSSEELASLKD 360
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Frame = +3
Query: 333 KHKHGITKKLS-SITKKRSSSPEVITLTQVG------LETKQDTVTPIPVQVASTTDLVA 491
K K + + L+ + K + +PEV+ + + G LE QD++TP PV+ ST + VA
Sbjct: 269 KKKPKVVQPLTCEVCKIQCDTPEVLRIHKTGKKHKKNLERLQDSITPKPVKPPSTPNTVA 328
>08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947
Length = 660
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 470 IDDRSRGRKN-RSCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAGGLP 619
++DR G ++ RSCKE++ + +P +DD + ++EEA P
Sbjct: 183 VEDRVSGHESGRSCKESNSSDLKRPENDPAVADDDDREAE--EEEEAAAAP 231
>06_01_0159 +
1193479-1194435,1194509-1194652,1194735-1194821,
1194910-1195244,1195600-1195840,1195921-1195995,
1196072-1196157,1196591-1196663,1196805-1197535,
1197613-1197784,1197862-1197948,1198255-1198344,
1198439-1198549
Length = 1062
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 434 ARYSNTDTSTSGIDD-RSRGRKNRSCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAG 610
A ++ T +DD +++G+ NRS + + D+ T+ RTSDD G + D+ E G
Sbjct: 770 ANHARTSDGNQKLDDAQAQGKANRSSEGSSLDTRTDN-ERSRTSDDEAGGNE-VDEGEKG 827
>06_01_0158 -
1186903-1187013,1187108-1187197,1187504-1187590,
1187668-1187839,1187917-1188647,1188789-1188861,
1189295-1189380,1189455-1189529,1189610-1189643,
1190331-1190622,1191073-1191439
Length = 705
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 434 ARYSNTDTSTSGIDD-RSRGRKNRSCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAG 610
A ++ T +DD +++G+ NRS + + D+ T+ RTSDD G + D+ E G
Sbjct: 413 ANHARTSDGNQKLDDAQAQGKANRSSEGSSLDTRTDN-ERSRTSDDEAGGNE-VDEGEKG 470
>01_01_0089 -
699533-699643,699738-700046,700134-700220,700298-700469,
700547-701373,701487-701559,701993-702078,702153-702227,
702308-702548,702905-703239,703328-703414,703497-703640,
703714-704670
Length = 1167
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 434 ARYSNTDTSTSGIDD-RSRGRKNRSCKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEAG 610
A ++ T +DD +++G+ NRS + + D+ T+ RTSDD G + D+ E G
Sbjct: 782 ANHARTSDGNQKLDDAQAQGKANRSSEGSSLDTRTDN-ERSRTSDDEAGGNE-VDEGEKG 839
>08_02_0849 -
21841470-21841883,21843748-21843813,21844768-21844951,
21845427-21847468,21848544-21848870
Length = 1010
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 213 TSQTIQSTWRTACQEDLKEATENLDEI-RDRKENERAVSTEKHKHGITKKLSSITKKRSS 389
TS + ++ +++ + LK + NLD R EN + KH + ++ S SS
Sbjct: 151 TSGSTENNEQSSAEHMLKLSGVNLDSFFAARMENTTTAAVPTQKHTVVQEKQSTDSHGSS 210
Query: 390 SPEVITLTQVGLETKQDTVTPIPVQVA 470
S E+ G +T I V A
Sbjct: 211 SLEMRATYLTGTKTSSQNTNQIEVTPA 237
>06_02_0251 -
13478902-13478952,13478989-13479055,13479168-13479379,
13480144-13481540,13481574-13482432,13482537-13482836
Length = 961
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/69 (21%), Positives = 34/69 (49%)
Frame = +2
Query: 344 RHHQEVIINYKKTQFLPRSDYSNPSRTRD*ARYSNTDTSTSGIDDRSRGRKNRSCKENDD 523
R H+++++ +K + RS + + + +N + STS + D ++S K + +
Sbjct: 640 RDHKQIVLANQKNNIISRSHNETQASSEIDSIGTNDNASTSSVYDLPEESIHQSAKNSTE 699
Query: 524 DSITEEMPE 550
++ E PE
Sbjct: 700 NTSYNEEPE 708
>03_06_0034 +
31197846-31198417,31198562-31198987,31199074-31199386,
31199510-31199560
Length = 453
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 458 STSGIDDRSRGRKNRSCKENDDDSITEEM 544
ST G+D+R R RK+ + D+I EEM
Sbjct: 321 STGGLDNRKRKRKSSQASMHMKDTIVEEM 349
>10_08_0299 -
16607152-16607322,16607465-16607785,16607870-16608121,
16608298-16608435,16608544-16608651,16608814-16609014,
16609109-16609233,16609252-16609321,16609919-16610455
Length = 640
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +2
Query: 512 ENDDDSITEEMP---EPRTSDDPKGSTKWFDDEEAGGL 616
++DDD +E P PR P G + DDEE GG+
Sbjct: 64 DDDDDDDDDEGPMVGPPRPPPQPAGGGEGEDDEEGGGV 101
>08_02_1508 + 27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +2
Query: 473 DDRSRGRKNRSCKENDDDSI---TEEMPEPRTSDDPKGSTK--WFDDEEAGGLP 619
D++ RG + +++D+ I TE+M R + P GST+ FD E G LP
Sbjct: 1191 DEKIRGTTGEALQKSDEGRISSNTEQMKSNRNNSKPDGSTEPTSFDGNE-GNLP 1243
>07_03_1696 -
28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 261 LKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVI 404
LKE T + R RKE A S ++G+T+ + + S+ E+I
Sbjct: 846 LKEQTSEVHGARKRKETSPADSGLNSQYGVTESKYELVANKDSADELI 893
>02_04_0170 + 20576149-20576889
Length = 246
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 142 VSRQTLRCFLSRTLFKPQASISVDKYKKHTVVSMCKFVFFFY 17
+ T+R L RT AS ++ +Y V S+ F+F FY
Sbjct: 162 IGNMTVRAPLRRTGVLAMASAALKRYNITAVTSLSMFMFMFY 203
>10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020
Length = 722
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 198 VAHRITSQTIQSTWRTACQEDLKEATENLDE 290
+AH + T+QS W+ C E K E L +
Sbjct: 320 LAHYLAMATVQSVWQENCMEQFKLVLEALHQ 350
>06_02_0186 +
12787866-12788055,12788575-12788642,12788864-12789007,
12789112-12789268,12789344-12789366,12789487-12789495,
12789694-12790108,12790449-12790652,12790741-12791201,
12791206-12791476,12791560-12791951
Length = 777
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 359 VIINYKKTQFLPRSDYSNPSRTRD*ARYS-NTDTSTSGIDDRSRGRKNRSCKENDDDSIT 535
+I+ +KT+ LP++ S + R S ++D T G D + S + DD
Sbjct: 560 LILEKRKTRKLPKARPSKKVKGRGPRSTSVDSDEETQGSPDYQESNDSSSITKTDDGDDD 619
Query: 536 EEMPEPRTSDDPKGSTKWFD 595
+ + T+ P+G T+ D
Sbjct: 620 GQGGQGTTNVPPRGHTQQSD 639
>05_05_0030 -
21698625-21698752,21699589-21699627,21699708-21699822,
21699927-21699992,21701064-21701203,21701424-21701473,
21701608-21702045,21702757-21702839,21702941-21702977,
21703366-21703457,21703531-21703615,21703950-21704029,
21704049-21704105,21704350-21704747,21706322-21707223,
21707331-21707421,21708123-21710273,21710375-21710813,
21711180-21711299
Length = 1836
Score = 28.3 bits (60), Expect = 6.6
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 5/141 (3%)
Frame = +3
Query: 201 AHRITSQTIQSTWRTACQEDLKEATENLDEIRDRKENERAV-----STEKHKHGITKKLS 365
+ R SQ QS C + L + +++I+ + E + S + + H +K
Sbjct: 248 SEREASQLQQSAEAVIC-DSLSKLESAMEKIQGQNPQESSGLVAEGSADDNIHKYHQKAK 306
Query: 366 SITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKRMTMIALPKKC 545
+ + S ++ TQ K+ T+T I +Q+A AE+ EA+K A K
Sbjct: 307 RARTQITHSDKIDLPTQAVSACKEKTITQIEMQIAD-----AERTEALKGEDAPAQKLKT 361
Query: 546 RNLGRLMIPKGLRNGLTTKKR 608
R R PK +R KK+
Sbjct: 362 RR--RKHRPKVIREDRPAKKQ 380
>12_02_0247 + 16409988-16411367
Length = 459
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 480 DLVAEKIEAVKRMTMIALPKKCRNLGRLMIPKGLRNGLTTKKRAG 614
D++ E E +T++ CR L R + +GLR L + AG
Sbjct: 27 DVIVEIAERSDPITLLRCAAACRQLRRAISGEGLRRELRLRNAAG 71
>02_05_0636 +
30536717-30537022,30538836-30538952,30539026-30539478,
30539589-30540647
Length = 644
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +3
Query: 297 DRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITLTQV-GLETKQDTVTPIPVQVAS 473
D + E + I +S I+ S E IT + GLE + T + PV V+
Sbjct: 190 DTPQMENLCNGHLELQNIIMLVSEISGVPKSDAERITSQLIEGLENMRVTDSKKPVSVSQ 249
Query: 474 TTDLVAEKIEAVKRMTMIALPKKCR 548
++D E K+ +A+P+ R
Sbjct: 250 SSDETKASPETHKKSDAVAIPEDFR 274
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,024,612
Number of Sequences: 37544
Number of extensions: 432565
Number of successful extensions: 1634
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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