Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0540.Seq
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   1.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   5.0  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   6.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.7  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 264 MQYRPQLPIHIHNDLRSFVPPTLGVXPS 347
           + Y P  P++ H+  R    P  GV P+
Sbjct: 160 LHYPPPPPVYTHHYARYHPYPNFGVPPA 187


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +2

Query: 221 QHQCCXTSNIRXRTNAIPTSVAYSHTQRPEIFCPAH 328
           Q  C  T  +    NAI   V     Q+P +  P H
Sbjct: 563 QQNCMCTHKVDIPLNAIVEIVLVDEVQQPNLSHPFH 598


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 73  NIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESPFR 195
           N++   ++PF          N+ V +L   NIT V +  FR
Sbjct: 204 NLVVAPSVPFEQDTGLGGLQNIKVLDLSFNNITSVAKQFFR 244


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 155 NSPISQEYKRVPSDFS*IRHP 217
           ++P+S   K+ PS F+   HP
Sbjct: 349 HNPMSHHLKQEPSGFTSSNHP 369


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 102 LNKFDCTCREQYAG 143
           +N F C C+E + G
Sbjct: 87  INAFQCICKEGWEG 100


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 160 AVEAPTPAYCSLQVQSNLLRK 98
           A+E P P   S+Q   N +RK
Sbjct: 483 AIEKPAPVKISVQEVLNRVRK 503


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,386
Number of Sequences: 336
Number of extensions: 2543
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)