Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0540.Seq
(518 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 35 0.008
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.045
SPCC1884.02 |nic1|SPCC757.01|NiCoT heavy metal ion transporter N... 32 0.059
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.059
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 30 0.24
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 29 0.42
SPAC1786.03 |cut11|SPAC24C9.01|integral membrane nucleoporin|Sch... 28 0.73
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 0.96
SPAC10F6.04 |||RCC domain protein Ats1 |Schizosaccharomyces pomb... 26 2.9
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 26 3.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 3.9
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 26 3.9
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 26 3.9
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 25 5.1
SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase Agn2|Schizo... 25 5.1
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 25 5.1
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 25 6.8
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 25 9.0
SPBP8B7.04 |mug45||sequence orphan|Schizosaccharomyces pombe|chr... 25 9.0
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 34.7 bits (76), Expect = 0.008
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 266 AIPTSVAYSHTQRPEIFCPAHTWSSXITXLRIYTAAATVTDNTNYTSNASNVYATFAINI 445
A P++ HTQ P+ +H + ATV +N Y S T N
Sbjct: 182 AAPSTATTQHTQLPKTSAVSHQKPHEAPSTAVKAPTATVAENEPYPKPQSVPTTTSPNNE 241
Query: 446 SNATSAT-DTIGTTNAACATSASV 514
+NA +T + I T + ATS S+
Sbjct: 242 NNALRSTANVINNTRQSTATSPSM 265
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.045
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 365 TAAATVTDNTNYTSNASNVYATFAINISNATSATDTIGTTNAACATSAS 511
T+ T N N ++A+N A + N + A + +T TTNAA TSA+
Sbjct: 55 TSVNTAVYNNNNNTSAANTNAAYNANTA-ANANANTATTTNAAATTSAA 102
>SPCC1884.02 |nic1|SPCC757.01|NiCoT heavy metal ion transporter
Nic1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 405
Score = 31.9 bits (69), Expect = 0.059
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 350 W*WXNSKCGRDKRSQVVVYVNRQLRSVLHLFVXGCWKFXNIGVVWGVGF 204
W W K G K V ++ R+++ + L V WK +G V+G+GF
Sbjct: 169 WLWMYRKSGVTKDEGVTGFLARKMQRLFRL-VDSPWKIYVLGFVFGLGF 216
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 31.9 bits (69), Expect = 0.059
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +2
Query: 239 TSNIRXRTNAIPTSVAYSHTQRPEIFCPAHTWSSXITXLRIYTAAATVTDNTNYTS--NA 412
+S RT + T+ S + RP +F P T S T+ TN+T NA
Sbjct: 169 SSRSSSRTTSHRTTSHKSSSYRPTVF-PYTTISHYNITNATNGTYCNGTNGTNFTCIVNA 227
Query: 413 SNVY-ATFAINISNATSATDTIGTTNAACATSASVP 517
SN +TF +N +N+T+ T++ +T+ + +P
Sbjct: 228 SNATNSTFWLNGTNSTNGTNSTNSTSTTSHSLTKLP 263
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 29.9 bits (64), Expect = 0.24
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENN 135
PR+ E T + +S I++P +Q + PF S+ A NN
Sbjct: 670 PRKNTEESTSSSSFSSLITSPASLQYDENPFKQSVVAELNNN 711
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 29.1 bits (62), Expect = 0.42
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +3
Query: 132 QYAGVGASTAQYHRSTRESLPTSAESD-TPNNTN--VAKLPTSAHEQMQYRP-QLPIHIH 299
Q AG G STA H R S T S +P+N N P +++ Q P + P+ +H
Sbjct: 163 QRAGAGVSTATSHTRRRSSAGTDPFSPVSPSNPNFLTPLKPIDGNQEWQQSPLESPLSMH 222
Query: 300 N 302
+
Sbjct: 223 S 223
>SPAC1786.03 |cut11|SPAC24C9.01|integral membrane
nucleoporin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.3 bits (60), Expect = 0.73
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 150 ASTAQYHRSTRE-SLPTSAESDTPNNTNVAKLPTSAHEQMQYRPQLPIHIHNDLRSFVPP 326
A++ + +ST + S TS +S TN+ P S HE++ +P+ N FVPP
Sbjct: 363 ATSLKILQSTGDFSAATSKKSGLTKKTNIPYSPNSNHEEIN---SIPLRNKN---IFVPP 416
Query: 327 TLGVXP 344
+ G P
Sbjct: 417 SQGHSP 422
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.9 bits (59), Expect = 0.96
Identities = 18/89 (20%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +2
Query: 239 TSNIRXRTNAIPTSVAYSHTQRPEIFCPAHTWSSX----ITXLRIYTAAATVTDNTNYTS 406
TS+ T+ +PTS A + + P T++S + L + + +++++ Y S
Sbjct: 683 TSSGFNTTSGLPTSSASTPLSNSTV-APTSTFTSSGFNTTSGLPTSSVSTPLSNSSAYPS 741
Query: 407 NASNVYATFAINISNATSATDTIGTTNAA 493
+ S+ ++ + ++++ T+T G+T+ +
Sbjct: 742 SGSSTFSRLSSTLTSSIIPTETFGSTSGS 770
Score = 26.2 bits (55), Expect = 2.9
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +3
Query: 12 SSTECRKNTHASSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRESL 191
+S+ T A++ S I S + L + T A +S+AQY+ S+ L
Sbjct: 228 ASSSLNSTTSATATSSSISSTVSSSTP---LTSSNSTTAATSASATSSSAQYNTSSL--L 282
Query: 192 PTSAESDTPNNTNVAKLPTSA 254
P+S S TP ++ + TSA
Sbjct: 283 PSSTPSSTPLSSANSTTATSA 303
>SPAC10F6.04 |||RCC domain protein Ats1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 351
Score = 26.2 bits (55), Expect = 2.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -2
Query: 163 WAVEAPTPAYCSLQVQSNLLRKGYCSSA*YWDLISLRSELACVFFRHSVDEAPK 2
W V A A+ Q ++ L CS + W +SL S CV+ D A K
Sbjct: 224 WNVAAECDAW---QANNSELSSSICSISANWSTLSLLSTEGCVYAFGRCDRAQK 274
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 272 PTSVAYSHTQRPEIFCPAHTWSSXITXLRIYTAAATVTDNTNYTSNASNVY 424
P ++ Y++T + P+ T + + T A++ +T Y S+A+NVY
Sbjct: 348 PAAINYNYTTNYSVSSPSVT--NPFFDVGSSTQNASLMGSTGYPSSANNVY 396
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 4/26 (15%)
Frame = +2
Query: 452 ATSATDT----IGTTNAACATSASVP 517
+TS+TDT + TT+ +C TS S+P
Sbjct: 154 STSSTDTNSNPLPTTSTSCTTSTSIP 179
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 4/26 (15%)
Frame = +2
Query: 452 ATSATDT----IGTTNAACATSASVP 517
+TS+TDT + TT+ +C TS S+P
Sbjct: 211 STSSTDTNSSPLPTTSTSCTTSTSIP 236
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 4/26 (15%)
Frame = +2
Query: 452 ATSATDT----IGTTNAACATSASVP 517
+TS+TDT + TT+ +C TS S+P
Sbjct: 267 STSSTDTNSSPLPTTSTSCTTSTSIP 292
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/82 (19%), Positives = 36/82 (43%)
Frame = +2
Query: 272 PTSVAYSHTQRPEIFCPAHTWSSXITXLRIYTAAATVTDNTNYTSNASNVYATFAINISN 451
PTS + + T + + + ++ + + VT TS +S + S+
Sbjct: 265 PTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSS 324
Query: 452 ATSATDTIGTTNAACATSASVP 517
+++ + +T+ +C TS S+P
Sbjct: 325 TGTSSSPLPSTSTSCTTSTSIP 346
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 377 TVTDNTNYTSNASNVYATFAINISNAT---SATDTIGTTNAACATSASVP 517
T T T TS ++ + + S+A+ S++ + +T+ +C TS S+P
Sbjct: 73 TSTSCTTDTSASTPIITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIP 122
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 303 RCVCE*ATEVGIAFVRXRMLEVXQHWCCLG 214
RCVC+ ++G +V+ + QH C+G
Sbjct: 22 RCVCKSQEDIGDTWVQCDGCDCWQHASCVG 51
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 25.8 bits (54), Expect = 3.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 106 TSLTAPAENNMPVWELQQPNITGV 177
T L+A +N + +W+L+ PN G+
Sbjct: 126 TFLSASLDNTIRLWDLRSPNCQGL 149
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 25.4 bits (53), Expect = 5.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 43 QAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESPFRLQLN 207
+A +S+ I+ N+ FST+ T P N+ P + ES F L+ N
Sbjct: 91 KATKDILSSVKIVWALNLRFSTAFTGPMLANLYCALYPNPGYSLCHESYFELKQN 145
>SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase
Agn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 5.1
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 404 SNASNVYATFAINISNATSATDTI 475
S S +Y T+ ++ NAT+++D+I
Sbjct: 309 SGISQLYVTYRVHSKNATASSDSI 332
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 25.4 bits (53), Expect = 5.1
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 135 YAGVGASTAQYHRSTRESLPTSAESDTPNNTNVAKLPTSAHEQ--MQYRPQLPIHIHNDL 308
YA + +Y R T+ + + ES + PTS++E+ +P P ++D
Sbjct: 178 YAAKASIQKRYERLTKRGVDQAHESSPVKKAKLDDYPTSSNEETISSVKPPSP---NSDS 234
Query: 309 RSFVP 323
+ F+P
Sbjct: 235 KFFLP 239
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 435 PSTSAMQLPQLIPSAQLMQPAQPVLQ 512
PS+S L +PS + P+ P LQ
Sbjct: 198 PSSSPQLLTSFLPSGSVSNPSSPYLQ 223
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +3
Query: 36 THASSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRESLPTSAE 206
T + +D I S Y +D++ +KF+ ++ A +G + + + ESL T A+
Sbjct: 770 TTSLNDADIILSDYISDQK----SKFESKQQDLIANIGKIVSNFLQEQNESLYTKAD 822
>SPBP8B7.04 |mug45||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 389 NTNYTSNASNVYATFAINISNATSATDTIG-TTNAACATSAS 511
N + A+ T NIS+ TSA +++G +NA+ ++S S
Sbjct: 201 NMGLSQRAAATSTTPVCNISSVTSAINSVGEISNASHSSSTS 242
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,094,751
Number of Sequences: 5004
Number of extensions: 42352
Number of successful extensions: 211
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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