Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0540.Seq
         (518 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    27   0.38 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   0.50 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   2.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   6.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   6.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   6.2  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 27.1 bits (57), Expect = 0.38
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = -3

Query: 201 LKSEGTLLYSCDIGLLKLPHR-HIVLCR--CSQTC*ERDIVHLHNIG 70
           LK  G  +  C  G  K+P     V C+  C +TC    IVH  NIG
Sbjct: 270 LKDNGACVRKCPKG--KMPQNSECVPCKGVCPKTCPGEGIVHSDNIG 314


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 377 TVTDNTNYTSNASNVYATFAINISNATSATDTI--GTTNAACATSASVP 517
           T  +N N  +N SN  AT     SNA  +  ++  G+ + +  T+ + P
Sbjct: 97  TNNNNNNNNNNGSNTGATVNSGSSNAALSNSSVLNGSNSGSATTTTTTP 145


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 240 VXQHWCCLGCRIQLKS 193
           V  HW C+GC   LK+
Sbjct: 58  VDLHWSCIGCTNMLKN 73


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 171 RSTRESLPTSAESDTPNNTN 230
           R  R+SLP ++ +++ NN N
Sbjct: 186 RDERDSLPNASSNNSNNNNN 205


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 171 RSTRESLPTSAESDTPNNTN 230
           R  R+SLP ++ +++ NN N
Sbjct: 186 RDERDSLPNASSNNSNNNNN 205


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 171 RSTRESLPTSAESDTPNNTN 230
           R  R+SLP ++ +++ NN N
Sbjct: 138 RDERDSLPNASSNNSNNNNN 157


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 171 RSTRESLPTSAESDTPNNTN 230
           R  R+SLP ++ +++ NN N
Sbjct: 186 RDERDSLPNASSNNSNNNNN 205


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,737
Number of Sequences: 2352
Number of extensions: 11768
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)