Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0540.Seq
(518 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118567-1|AAM49936.1| 971|Drosophila melanogaster LD40170p pro... 31 0.71
AE014134-403|AAN10428.1| 971|Drosophila melanogaster CG9866-PB,... 31 0.71
AE014134-402|AAF51260.1| 971|Drosophila melanogaster CG9866-PA,... 31 0.71
AY118913-1|AAM50773.1| 399|Drosophila melanogaster LD21748p pro... 30 1.6
AE014296-1658|AAF50269.1| 399|Drosophila melanogaster CG3891-PA... 30 1.6
AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-P... 30 2.2
AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p pro... 29 2.9
AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA... 29 2.9
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P... 29 2.9
BT022200-1|AAY51594.1| 751|Drosophila melanogaster IP01101p pro... 29 3.8
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 5.0
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 5.0
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 5.0
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 5.0
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 5.0
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 5.0
Y13674-1|CAB55550.1| 693|Drosophila melanogaster cramped protei... 28 6.6
BT029664-1|ABL75722.1| 294|Drosophila melanogaster IP17310p pro... 28 6.6
BT022126-1|AAY51521.1| 712|Drosophila melanogaster IP08939p pro... 28 6.6
AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-P... 28 6.6
AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA... 28 6.6
AE014296-1968|AAN11874.2| 728|Drosophila melanogaster CG11711-P... 28 6.6
AB235207-1|BAF31332.1| 1089|Drosophila melanogaster CG32611 prot... 28 6.6
X98235-1|CAA66887.1| 1182|Drosophila melanogaster TF125 protein. 28 8.7
AY118564-1|AAM49933.1| 578|Drosophila melanogaster LD40028p pro... 28 8.7
AY060995-1|AAL28543.1| 322|Drosophila melanogaster HL01227p pro... 28 8.7
AE014297-3402|AAF56201.2| 1182|Drosophila melanogaster CG13598-P... 28 8.7
AE014296-939|AAN12240.1| 499|Drosophila melanogaster CG32423-PD... 28 8.7
AE014296-938|AAF50790.2| 499|Drosophila melanogaster CG32423-PB... 28 8.7
AE014296-937|AAF50788.5| 578|Drosophila melanogaster CG32423-PA... 28 8.7
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 28 8.7
>AY118567-1|AAM49936.1| 971|Drosophila melanogaster LD40170p protein.
Length = 971
Score = 31.5 bits (68), Expect = 0.71
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 28 EKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITG 174
+K ++ + + SN NI MNNI S P+ N+ P W+ N G
Sbjct: 909 KKQLLRTLSDSSSNMNISNMNNISNLNSSNTPSANSNPPWKGNSSNPGG 957
>AE014134-403|AAN10428.1| 971|Drosophila melanogaster CG9866-PB,
isoform B protein.
Length = 971
Score = 31.5 bits (68), Expect = 0.71
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 28 EKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITG 174
+K ++ + + SN NI MNNI S P+ N+ P W+ N G
Sbjct: 909 KKQLLRTLSDSSSNMNISNMNNISNLNSSNTPSANSNPPWKGNSSNPGG 957
>AE014134-402|AAF51260.1| 971|Drosophila melanogaster CG9866-PA,
isoform A protein.
Length = 971
Score = 31.5 bits (68), Expect = 0.71
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 28 EKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNITG 174
+K ++ + + SN NI MNNI S P+ N+ P W+ N G
Sbjct: 909 KKQLLRTLSDSSSNMNISNMNNISNLNSSNTPSANSNPPWKGNSSNPGG 957
>AY118913-1|AAM50773.1| 399|Drosophila melanogaster LD21748p
protein.
Length = 399
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 287 YSHTQRPEIFCPAHTWSSXITXLRIYTAAATVTDNTNYTSNASNVYATFAINISNATSAT 466
+S T RP T +S + +AAA +N N ++++SN AT N+S +T+A
Sbjct: 5 FSATSRPSATPRMCTTASAVGAAA--SAAAAAGNNNNNSNSSSNNNATTGNNLSVSTAAG 62
Query: 467 DTIGTTNAA 493
G TNAA
Sbjct: 63 ---GATNAA 68
>AE014296-1658|AAF50269.1| 399|Drosophila melanogaster CG3891-PA
protein.
Length = 399
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 287 YSHTQRPEIFCPAHTWSSXITXLRIYTAAATVTDNTNYTSNASNVYATFAINISNATSAT 466
+S T RP T +S + +AAA +N N ++++SN AT N+S +T+A
Sbjct: 5 FSATSRPSATPRMCTTASAVGAAA--SAAAAAGNNNNNSNSSSNNNATTGNNLSVSTAAG 62
Query: 467 DTIGTTNAA 493
G TNAA
Sbjct: 63 ---GATNAA 68
>AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-PA,
isoform A protein.
Length = 1853
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +2
Query: 353 LRIYTAAATVTDNTNYTSNASNVYATFAINISNATSATDTIGTTNAACAT 502
L+ T A T TDN T+NA T I + + S+TD TT A T
Sbjct: 1577 LKTTTPAPTTTDNIPTTTNAPT--TTKEITTTTSASSTDETTTTTAPTTT 1624
>AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p protein.
Length = 1371
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 1 IWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWE 150
I++ +P + H+ +QTSA + ++MQ P +T L + P E
Sbjct: 1046 IYKHSEPKIRRIHITSQTSAENGISLMQGQESPTTTQLLSSVPTAQPTVE 1095
>AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA
protein.
Length = 1027
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Frame = +3
Query: 183 ESLPTSAESDTPNNTNVAKLPTSAHEQMQYRPQLPIHIHNDLRSFVPPTLGVXP---SPX 353
E+ P+S S TP+N N +L E + ++ H H+ R PP L P SP
Sbjct: 413 EASPSSTTSATPSNKNSEELNYGEDELENFFDEVESHTHH-TRVPAPPALAPAPPARSPT 471
Query: 354 FESXXXXXXXXXXXXXXXXXAMFTQPLPSTSAMQLPQL 467
+ P PS SA + PQL
Sbjct: 472 PAAAAPPPPPPPPSPSYEPPPPSYAPPPSLSAAKPPQL 509
>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
protein.
Length = 2938
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 377 TVTDNTNYTSNASNVYATFAINISNA-TSATD-TIGTTN 487
T+T T +SNA+N T N +NA T+AT+ T TTN
Sbjct: 2438 TLTTTTTTSSNATNAATTTTANATNATTTATNPTTTTTN 2476
>BT022200-1|AAY51594.1| 751|Drosophila melanogaster IP01101p
protein.
Length = 751
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 302 RPEIFCPAHTWSSXITXLRIYTAAATVTDNTNYTSNASNVYATFAINISNATSATDTIGT 481
R E+ H L + AAA +N N TS+ +N + + N SN + + G
Sbjct: 28 RHELMGRLHKIEPADVELEVLAAAAAAANNNNNTSSNNNHSSNSSSNNSNGSQTPN--GN 85
Query: 482 TNAACAT 502
N++ AT
Sbjct: 86 NNSSLAT 92
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQT----SAISNPNIMQMNNIPFSTSLTA----PAE-----NNMPVWE 150
P+QP ++ ++Q T S + NP ++ TS A P N V +
Sbjct: 4758 PQQPPQQQANLQINTTLIPSGLPNPITALGKSVQLETSAAALLNKPVSVLVKGNASQVIQ 4817
Query: 151 LQQPNITGVQESPFRLQLNPTP 216
QQP I + P LQ NP P
Sbjct: 4818 QQQPQIVAPAKQPIILQQNPLP 4839
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQT----SAISNPNIMQMNNIPFSTSLTA----PAE-----NNMPVWE 150
P+QP ++ ++Q T S + NP ++ TS A P N V +
Sbjct: 4764 PQQPPQQQANLQINTTLIPSGLPNPITALGKSVQLETSAAALLNKPVSVLVKGNASQVIQ 4823
Query: 151 LQQPNITGVQESPFRLQLNPTP 216
QQP I + P LQ NP P
Sbjct: 4824 QQQPQIVAPAKQPIILQQNPLP 4845
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQT----SAISNPNIMQMNNIPFSTSLTA----PAE-----NNMPVWE 150
P+QP ++ ++Q T S + NP ++ TS A P N V +
Sbjct: 4707 PQQPPQQQANLQINTTLIPSGLPNPITALGKSVQLETSAAALLNKPVSVLVKGNASQVIQ 4766
Query: 151 LQQPNITGVQESPFRLQLNPTP 216
QQP I + P LQ NP P
Sbjct: 4767 QQQPQIVAPAKQPIILQQNPLP 4788
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQT----SAISNPNIMQMNNIPFSTSLTA----PAE-----NNMPVWE 150
P+QP ++ ++Q T S + NP ++ TS A P N V +
Sbjct: 4707 PQQPPQQQANLQINTTLIPSGLPNPITALGKSVQLETSAAALLNKPVSVLVKGNASQVIQ 4766
Query: 151 LQQPNITGVQESPFRLQLNPTP 216
QQP I + P LQ NP P
Sbjct: 4767 QQQPQIVAPAKQPIILQQNPLP 4788
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQT----SAISNPNIMQMNNIPFSTSLTA----PAE-----NNMPVWE 150
P+QP ++ ++Q T S + NP ++ TS A P N V +
Sbjct: 4764 PQQPPQQQANLQINTTLIPSGLPNPITALGKSVQLETSAAALLNKPVSVLVKGNASQVIQ 4823
Query: 151 LQQPNITGVQESPFRLQLNPTP 216
QQP I + P LQ NP P
Sbjct: 4824 QQQPQIVAPAKQPIILQQNPLP 4845
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Frame = +1
Query: 10 PRQPNAEKTHMQAQT----SAISNPNIMQMNNIPFSTSLTA----PAE-----NNMPVWE 150
P+QP ++ ++Q T S + NP ++ TS A P N V +
Sbjct: 4764 PQQPPQQQANLQINTTLIPSGLPNPITALGKSVQLETSAAALLNKPVSVLVKGNASQVIQ 4823
Query: 151 LQQPNITGVQESPFRLQLNPTP 216
QQP I + P LQ NP P
Sbjct: 4824 QQQPQIVAPAKQPIILQQNPLP 4845
>Y13674-1|CAB55550.1| 693|Drosophila melanogaster cramped protein
protein.
Length = 693
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 365 TAAATVTDNTNYTSNASNVYATFAINISNATSATDTIGTTNAACATSASVP 517
T + N N TS +SN Y + + N S ++++ I TT A S P
Sbjct: 640 TQTGSSASNANQTSASSNCYVSASSNSSTSSTSLPYIPTTVIAWNASGPSP 690
>BT029664-1|ABL75722.1| 294|Drosophila melanogaster IP17310p
protein.
Length = 294
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 16 QPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNIT--GVQESP 189
QP ++TH+ Q P + Q++ I S+ + EN P+ + N+ + +
Sbjct: 94 QPQTQQTHVVQQQPPQQQPAVEQISQI--SSQVPVQQENLQPIQVNKDANVATDAMSLNS 151
Query: 190 FRLQLNPTPQTTP 228
L P P+T P
Sbjct: 152 AHGALEPAPKTEP 164
>BT022126-1|AAY51521.1| 712|Drosophila melanogaster IP08939p
protein.
Length = 712
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 374 ATVTDNTNYTSNAS-NVYATFAINISNATSATDTIGTTNAACATSAS 511
A D T T A+ AT A S +TSAT T A ATSAS
Sbjct: 68 AAALDATAATQAATATATATAAAATSTSTSATSAAATAAATAATSAS 114
>AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-PB
protein.
Length = 1103
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 374 ATVTDNTNYTSNAS-NVYATFAINISNATSATDTIGTTNAACATSAS 511
A D T T A+ AT A S +TSAT T A ATSAS
Sbjct: 112 AAALDATAATQAATATATATAAAATSTSTSATSAAATAAATAATSAS 158
>AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA
protein.
Length = 2352
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 16 QPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPVWELQQPNIT--GVQESP 189
QP ++TH+ Q P + Q++ I S+ + EN P+ + N+ + +
Sbjct: 1279 QPQTQQTHVVQQQPPQQQPAVEQISQI--SSQVPVQQENLQPIQVNKDANVATDAMSLNS 1336
Query: 190 FRLQLNPTPQTTP 228
L P P+T P
Sbjct: 1337 AHGALEPAPKTEP 1349
>AE014296-1968|AAN11874.2| 728|Drosophila melanogaster CG11711-PA,
isoform A protein.
Length = 728
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +3
Query: 15 STECRKNTHASSDLSDIKSQYYADEQYPFLNKFDCTCREQYAGVGASTAQYHRSTRESLP 194
S C N + + + +++ + + ++C EQ A AS AQ + + P
Sbjct: 176 SNSCINNHNNTHYRNSKNTRHSSSNNNDYSGNYNCKTSEQQAWK-ASAAQQLLISDRNYP 234
Query: 195 TSAESDTPNNTN 230
+S ++T NNTN
Sbjct: 235 SSNTNNTNNNTN 246
>AB235207-1|BAF31332.1| 1089|Drosophila melanogaster CG32611
protein.
Length = 1089
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 374 ATVTDNTNYTSNAS-NVYATFAINISNATSATDTIGTTNAACATSAS 511
A D T T A+ AT A S +TSAT T A ATSAS
Sbjct: 155 AAALDATAATQAATATATATAAAATSTSTSATSAAATAAATAATSAS 201
>X98235-1|CAA66887.1| 1182|Drosophila melanogaster TF125 protein.
Length = 1182
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 1 IWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPV 144
I++ +P + H+ +QTSA + ++MQ + +TS T +M +
Sbjct: 1055 IYKHSEPKIRRIHITSQTSAENGISLMQGQGMRLATSNTNSTSASMSI 1102
>AY118564-1|AAM49933.1| 578|Drosophila melanogaster LD40028p
protein.
Length = 578
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 356 RIYTAAATVTDNTNYTSNASNVYATFAINISNATSATDTIG 478
R+ TAA+ N++ +SN + T + ++SN T+ +G
Sbjct: 172 RVPTAASPSNTNSSSSSNTGSQSGTLSTSLSNTTNTNTNMG 212
>AY060995-1|AAL28543.1| 322|Drosophila melanogaster HL01227p
protein.
Length = 322
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 356 RIYTAAATVTDNTNYTSNASNVYATFAINISNATSATDTIG 478
R+ TAA+ N++ +SN + T + ++SN T+ +G
Sbjct: 77 RVPTAASPSNTNSSSSSNTGSQSGTLSTSLSNTTNTNTNMG 117
>AE014297-3402|AAF56201.2| 1182|Drosophila melanogaster CG13598-PA,
isoform A protein.
Length = 1182
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 1 IWEPRQPNAEKTHMQAQTSAISNPNIMQMNNIPFSTSLTAPAENNMPV 144
I++ +P + H+ +QTSA + ++MQ + +TS T +M +
Sbjct: 1055 IYKHSEPKIRRIHITSQTSAENGISLMQGQGMRLATSNTNSTSASMSI 1102
>AE014296-939|AAN12240.1| 499|Drosophila melanogaster CG32423-PD,
isoform D protein.
Length = 499
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 356 RIYTAAATVTDNTNYTSNASNVYATFAINISNATSATDTIG 478
R+ TAA+ N++ +SN + T + ++SN T+ +G
Sbjct: 77 RVPTAASPSNTNSSSSSNTGSQSGTLSTSLSNTTNTNTNMG 117
>AE014296-938|AAF50790.2| 499|Drosophila melanogaster CG32423-PB,
isoform B protein.
Length = 499
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 356 RIYTAAATVTDNTNYTSNASNVYATFAINISNATSATDTIG 478
R+ TAA+ N++ +SN + T + ++SN T+ +G
Sbjct: 77 RVPTAASPSNTNSSSSSNTGSQSGTLSTSLSNTTNTNTNMG 117
>AE014296-937|AAF50788.5| 578|Drosophila melanogaster CG32423-PA,
isoform A protein.
Length = 578
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 356 RIYTAAATVTDNTNYTSNASNVYATFAINISNATSATDTIG 478
R+ TAA+ N++ +SN + T + ++SN T+ +G
Sbjct: 172 RVPTAASPSNTNSSSSSNTGSQSGTLSTSLSNTTNTNTNMG 212
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 171 RSTRESLPTSAESDTPNNTNVAKLPTSAHEQMQYR 275
RST PT+ S +P T + P H Q Y+
Sbjct: 1153 RSTTTPCPTTTPSASPTRTTTTRRPCPCHPQPPYQ 1187
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,927,003
Number of Sequences: 53049
Number of extensions: 525100
Number of successful extensions: 2657
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2653
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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