Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0540.Seq
         (518 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    25   0.47 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   0.82 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   1.9  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   1.9  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    23   2.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.7  

>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 42  ASSDLSDIKSQYYADEQYPFLNKFDC 119
           A  DLSD+KS Y A+ +   + KF C
Sbjct: 30  AGFDLSDLKSMYEANSEEQ-MKKFGC 54


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 145 TPAYCSLQVQSNLLRKGYCSSA*YWDLISLRSEL 44
           TP Y + +V   +L KG+  SA YW L  L  EL
Sbjct: 528 TPEYVAPEV---ILNKGHDISADYWSLGVLMFEL 558


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 389 NTNYTSNASNVYATFAINI 445
           N NY +N   +Y  + INI
Sbjct: 106 NNNYNNNYKKLYKNYIINI 124


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 389 NTNYTSNASNVYATFAINI 445
           N NY +N   +Y  + INI
Sbjct: 106 NNNYNNNYKKLYKNYIINI 124


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = +3

Query: 42  ASSDLSDIKSQY--YADEQYPFLNKFDCTCREQYAGVGASTAQYHR---STRESLPTSAE 206
           A  DLSD+KS Y   ++EQ   L  F+    ++   +  +T    +    TRE  P    
Sbjct: 30  AGFDLSDLKSMYESNSEEQMKKLGCFEACVFQKLHFMDGNTLNVEKLESGTRELTPDDFT 89

Query: 207 SD 212
            D
Sbjct: 90  ED 91


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 263 NAIPTSVAYSHTQRPEI 313
           NA+ T +A +H Q P+I
Sbjct: 368 NALQTVLAQNHPQHPDI 384


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 267 QYRPQLPIHIHNDL 308
           QY+  LP++ +NDL
Sbjct: 447 QYQQSLPVYQYNDL 460


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 205 NPTPQTTPMLXNFQHPXTNK 264
           NPTPQ T  L  F  P   +
Sbjct: 448 NPTPQVTWALDGFALPTNGR 467


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 205 NPTPQTTPMLXNFQHPXTNK 264
           NPTPQ T  L  F  P   +
Sbjct: 448 NPTPQVTWALDGFALPTNGR 467


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,249
Number of Sequences: 438
Number of extensions: 3056
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)