Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0538.Seq
         (698 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10801| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  

>SB_10801| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 910

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 530 GIMYYSCHCIKRNGLQHDCR 589
           G+M+ SC C+   GL H+C+
Sbjct: 763 GLMHVSCQCVLVRGLMHECQ 782


>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 473

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 122 FYYNHVYSMRPYGMLQI*RLRSSAPVFASVSFQAKWLTRLPVFSK 256
           FYY+H+ S      L++  +    P+FA +  + +++ +LP F K
Sbjct: 103 FYYDHLMSRDGSKPLRVRSMVGLVPLFACLVLEDEFVQKLPGFKK 147


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,562,518
Number of Sequences: 59808
Number of extensions: 414443
Number of successful extensions: 1418
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)