Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0536.Seq
         (538 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   4.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   4.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   4.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   8.0  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 451 LSERLLYPGTV 483
           L ER++YPGT+
Sbjct: 25  LEERIIYPGTL 35


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 451 LSERLLYPGTV 483
           L ER++YPGT+
Sbjct: 30  LEERIIYPGTL 40


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 127 GEWWLPDQTCH 95
           G+W+LP   CH
Sbjct: 238 GKWYLPSGGCH 248


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 451 LSERLLYPGTV 483
           L ER++YPGT+
Sbjct: 30  LEERIIYPGTL 40


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 130 SGEWWLPDQTCHFVVSV 80
           S E W+PD   H V SV
Sbjct: 112 SYEIWVPDIVMHSVTSV 128


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.127    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,399
Number of Sequences: 438
Number of extensions: 1991
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)